Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf38bQ80SY5 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Prpf38bQ80SY5 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf38bQ80SY5 Gm13392-201ENSMUST00000117708 150 ntBASIC14.74□□□□□ -0.05
Prpf38bQ80SY5 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.74□□□□□ -0.05
Prpf38bQ80SY5 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.74□□□□□ -0.05
Prpf38bQ80SY5 Snora78-201ENSMUST00000158630 128 ntBASIC14.74□□□□□ -0.05
Prpf38bQ80SY5 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf38bQ80SY5 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf38bQ80SY5 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC14.74□□□□□ -0.05
Prpf38bQ80SY5 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.74□□□□□ -0.05
Prpf38bQ80SY5 Gm42693-201ENSMUST00000196779 631 ntBASIC14.74□□□□□ -0.05
Prpf38bQ80SY5 Gm43703-201ENSMUST00000200523 763 ntBASIC14.74□□□□□ -0.05
Prpf38bQ80SY5 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf38bQ80SY5 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC14.74□□□□□ -0.05
Prpf38bQ80SY5 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.74□□□□□ -0.05
Prpf38bQ80SY5 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Prpf38bQ80SY5 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf38bQ80SY5 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Prpf38bQ80SY5 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf38bQ80SY5 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf38bQ80SY5 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf38bQ80SY5 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf38bQ80SY5 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf38bQ80SY5 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf38bQ80SY5 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf38bQ80SY5 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf38bQ80SY5 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf38bQ80SY5 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf38bQ80SY5 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf38bQ80SY5 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf38bQ80SY5 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf38bQ80SY5 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.73□□□□□ -0.05
Prpf38bQ80SY5 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf38bQ80SY5 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf38bQ80SY5 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf38bQ80SY5 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Prpf38bQ80SY5 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf38bQ80SY5 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf38bQ80SY5 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.73□□□□□ -0.05
Prpf38bQ80SY5 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf38bQ80SY5 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Prpf38bQ80SY5 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
Prpf38bQ80SY5 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf38bQ80SY5 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf38bQ80SY5 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf38bQ80SY5 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf38bQ80SY5 Gm27701-201ENSMUST00000184498 110 ntBASIC14.73□□□□□ -0.05
Prpf38bQ80SY5 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.73□□□□□ -0.05
Prpf38bQ80SY5 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.73□□□□□ -0.05
Prpf38bQ80SY5 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf38bQ80SY5 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf38bQ80SY5 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf38bQ80SY5 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf38bQ80SY5 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf38bQ80SY5 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf38bQ80SY5 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf38bQ80SY5 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Prpf38bQ80SY5 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf38bQ80SY5 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Prpf38bQ80SY5 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.73□□□□□ -0.05
Prpf38bQ80SY5 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf38bQ80SY5 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf38bQ80SY5 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf38bQ80SY5 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Prpf38bQ80SY5 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Prpf38bQ80SY5 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf38bQ80SY5 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38bQ80SY5 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38bQ80SY5 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38bQ80SY5 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38bQ80SY5 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Prpf38bQ80SY5 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Prpf38bQ80SY5 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38bQ80SY5 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.72□□□□□ -0.05
Prpf38bQ80SY5 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38bQ80SY5 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38bQ80SY5 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38bQ80SY5 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
Prpf38bQ80SY5 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38bQ80SY5 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38bQ80SY5 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Prpf38bQ80SY5 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38bQ80SY5 Gm15198-201ENSMUST00000117283 177 ntBASIC14.72□□□□□ -0.05
Prpf38bQ80SY5 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC14.72□□□□□ -0.05
Prpf38bQ80SY5 Gm17420-201ENSMUST00000164753 153 ntBASIC14.72□□□□□ -0.05
Prpf38bQ80SY5 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.72□□□□□ -0.05
Prpf38bQ80SY5 Gm28760-201ENSMUST00000185995 736 ntBASIC14.72□□□□□ -0.05
Prpf38bQ80SY5 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38bQ80SY5 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14.72□□□□□ -0.05
Prpf38bQ80SY5 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38bQ80SY5 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38bQ80SY5 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38bQ80SY5 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.72□□□□□ -0.05
Prpf38bQ80SY5 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38bQ80SY5 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
Prpf38bQ80SY5 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38bQ80SY5 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38bQ80SY5 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Prpf38bQ80SY5 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms