Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Snrnp40Q6PE01 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Snrnp40Q6PE01 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Snrnp40Q6PE01 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Snrnp40Q6PE01 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Snrnp40Q6PE01 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Snrnp40Q6PE01 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Snrnp40Q6PE01 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Snrnp40Q6PE01 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Snrnp40Q6PE01 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Snrnp40Q6PE01 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Snrnp40Q6PE01 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Snrnp40Q6PE01 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Snrnp40Q6PE01 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Snrnp40Q6PE01 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Snrnp40Q6PE01 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.33□□□□□ -0.44
Snrnp40Q6PE01 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Snrnp40Q6PE01 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Snrnp40Q6PE01 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Snrnp40Q6PE01 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.33□□□□□ -0.44
Snrnp40Q6PE01 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.33□□□□□ -0.44
Snrnp40Q6PE01 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Snrnp40Q6PE01 Gm27514-201ENSMUST00000183692 110 ntBASIC12.33□□□□□ -0.44
Snrnp40Q6PE01 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.33□□□□□ -0.44
Snrnp40Q6PE01 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Snrnp40Q6PE01 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.33□□□□□ -0.44
Snrnp40Q6PE01 Gm6013-201ENSMUST00000212264 699 ntBASIC12.33□□□□□ -0.44
Snrnp40Q6PE01 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.33□□□□□ -0.44
Snrnp40Q6PE01 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Snrnp40Q6PE01 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Snrnp40Q6PE01 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.33□□□□□ -0.44
Snrnp40Q6PE01 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Snrnp40Q6PE01 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.33□□□□□ -0.44
Snrnp40Q6PE01 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Snrnp40Q6PE01 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Snrnp40Q6PE01 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Snrnp40Q6PE01 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.33□□□□□ -0.44
Snrnp40Q6PE01 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Snrnp40Q6PE01 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Snrnp40Q6PE01 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Snrnp40Q6PE01 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Snrnp40Q6PE01 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Snrnp40Q6PE01 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Snrnp40Q6PE01 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Snrnp40Q6PE01 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Snrnp40Q6PE01 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Snrnp40Q6PE01 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.32□□□□□ -0.44
Snrnp40Q6PE01 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.32□□□□□ -0.44
Snrnp40Q6PE01 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Snrnp40Q6PE01 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC12.32□□□□□ -0.44
Snrnp40Q6PE01 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Snrnp40Q6PE01 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Snrnp40Q6PE01 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Snrnp40Q6PE01 Gm16177-201ENSMUST00000120728 718 ntBASIC12.32□□□□□ -0.44
Snrnp40Q6PE01 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.32□□□□□ -0.44
Snrnp40Q6PE01 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.32□□□□□ -0.44
Snrnp40Q6PE01 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.32□□□□□ -0.44
Snrnp40Q6PE01 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.32□□□□□ -0.44
Snrnp40Q6PE01 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Snrnp40Q6PE01 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.32□□□□□ -0.44
Snrnp40Q6PE01 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.32□□□□□ -0.44
Snrnp40Q6PE01 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Snrnp40Q6PE01 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Snrnp40Q6PE01 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Snrnp40Q6PE01 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Snrnp40Q6PE01 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Snrnp40Q6PE01 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Snrnp40Q6PE01 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Snrnp40Q6PE01 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Snrnp40Q6PE01 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Snrnp40Q6PE01 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Snrnp40Q6PE01 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Snrnp40Q6PE01 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.32□□□□□ -0.44
Snrnp40Q6PE01 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Snrnp40Q6PE01 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Snrnp40Q6PE01 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Snrnp40Q6PE01 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Snrnp40Q6PE01 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Snrnp40Q6PE01 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Snrnp40Q6PE01 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Snrnp40Q6PE01 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Snrnp40Q6PE01 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Snrnp40Q6PE01 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Snrnp40Q6PE01 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Snrnp40Q6PE01 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Snrnp40Q6PE01 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.31□□□□□ -0.44
Snrnp40Q6PE01 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.31□□□□□ -0.44
Snrnp40Q6PE01 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Snrnp40Q6PE01 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Snrnp40Q6PE01 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Snrnp40Q6PE01 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.31□□□□□ -0.44
Snrnp40Q6PE01 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Snrnp40Q6PE01 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.31□□□□□ -0.44
Snrnp40Q6PE01 Gm18054-201ENSMUST00000207539 555 ntBASIC12.31□□□□□ -0.44
Snrnp40Q6PE01 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.31□□□□□ -0.44
Snrnp40Q6PE01 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Snrnp40Q6PE01 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.31□□□□□ -0.44
Snrnp40Q6PE01 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.31□□□□□ -0.44
Snrnp40Q6PE01 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Snrnp40Q6PE01 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms