Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc85bQ6PDY0 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc85bQ6PDY0 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc85bQ6PDY0 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Ccdc85bQ6PDY0 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc85bQ6PDY0 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc85bQ6PDY0 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Ccdc85bQ6PDY0 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc85bQ6PDY0 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc85bQ6PDY0 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Ccdc85bQ6PDY0 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc85bQ6PDY0 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc85bQ6PDY0 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc85bQ6PDY0 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
Ccdc85bQ6PDY0 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc85bQ6PDY0 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ccdc85bQ6PDY0 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ccdc85bQ6PDY0 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc85bQ6PDY0 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc85bQ6PDY0 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.62□□□□□ -0.07
Ccdc85bQ6PDY0 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ccdc85bQ6PDY0 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.62□□□□□ -0.07
Ccdc85bQ6PDY0 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Ccdc85bQ6PDY0 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc85bQ6PDY0 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC14.62□□□□□ -0.07
Ccdc85bQ6PDY0 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.62□□□□□ -0.07
Ccdc85bQ6PDY0 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.62□□□□□ -0.07
Ccdc85bQ6PDY0 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc85bQ6PDY0 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc85bQ6PDY0 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.62□□□□□ -0.07
Ccdc85bQ6PDY0 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc85bQ6PDY0 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Ccdc85bQ6PDY0 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Ccdc85bQ6PDY0 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc85bQ6PDY0 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc85bQ6PDY0 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.62□□□□□ -0.07
Ccdc85bQ6PDY0 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc85bQ6PDY0 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc85bQ6PDY0 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.62□□□□□ -0.07
Ccdc85bQ6PDY0 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc85bQ6PDY0 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.61□□□□□ -0.07
Ccdc85bQ6PDY0 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc85bQ6PDY0 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc85bQ6PDY0 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc85bQ6PDY0 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc85bQ6PDY0 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ccdc85bQ6PDY0 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc85bQ6PDY0 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ccdc85bQ6PDY0 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Ccdc85bQ6PDY0 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Ccdc85bQ6PDY0 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Ccdc85bQ6PDY0 Gm16177-201ENSMUST00000120728 718 ntBASIC14.61□□□□□ -0.07
Ccdc85bQ6PDY0 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC14.61□□□□□ -0.07
Ccdc85bQ6PDY0 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.61□□□□□ -0.07
Ccdc85bQ6PDY0 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc85bQ6PDY0 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Ccdc85bQ6PDY0 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.61□□□□□ -0.07
Ccdc85bQ6PDY0 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.61□□□□□ -0.07
Ccdc85bQ6PDY0 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC14.61□□□□□ -0.07
Ccdc85bQ6PDY0 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.61□□□□□ -0.07
Ccdc85bQ6PDY0 AC155637.1-201ENSMUST00000218560 636 ntBASIC14.61□□□□□ -0.07
Ccdc85bQ6PDY0 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Ccdc85bQ6PDY0 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc85bQ6PDY0 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc85bQ6PDY0 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc85bQ6PDY0 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc85bQ6PDY0 Gm10012-201ENSMUST00000078252 192 ntBASIC14.61□□□□□ -0.07
Ccdc85bQ6PDY0 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc85bQ6PDY0 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc85bQ6PDY0 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc85bQ6PDY0 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.61□□□□□ -0.07
Ccdc85bQ6PDY0 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc85bQ6PDY0 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc85bQ6PDY0 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc85bQ6PDY0 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc85bQ6PDY0 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc85bQ6PDY0 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc85bQ6PDY0 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc85bQ6PDY0 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc85bQ6PDY0 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc85bQ6PDY0 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc85bQ6PDY0 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.6□□□□□ -0.07
Ccdc85bQ6PDY0 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc85bQ6PDY0 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc85bQ6PDY0 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc85bQ6PDY0 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc85bQ6PDY0 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc85bQ6PDY0 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc85bQ6PDY0 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.6□□□□□ -0.07
Ccdc85bQ6PDY0 Gm22331-201ENSMUST00000158066 136 ntBASIC14.6□□□□□ -0.07
Ccdc85bQ6PDY0 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Ccdc85bQ6PDY0 Gm4804-201ENSMUST00000182234 999 ntBASIC14.6□□□□□ -0.07
Ccdc85bQ6PDY0 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC14.6□□□□□ -0.07
Ccdc85bQ6PDY0 Gm38002-201ENSMUST00000193255 180 ntBASIC14.6□□□□□ -0.07
Ccdc85bQ6PDY0 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.6□□□□□ -0.07
Ccdc85bQ6PDY0 Gm43758-201ENSMUST00000199500 367 ntBASIC14.6□□□□□ -0.07
Ccdc85bQ6PDY0 AC140406.1-201ENSMUST00000226481 465 ntBASIC14.6□□□□□ -0.07
Ccdc85bQ6PDY0 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.6□□□□□ -0.07
Ccdc85bQ6PDY0 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc85bQ6PDY0 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms