Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcc2Q6PDG5 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcc2Q6PDG5 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcc2Q6PDG5 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Smarcc2Q6PDG5 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC16.43■□□□□ 0.22
Smarcc2Q6PDG5 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcc2Q6PDG5 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcc2Q6PDG5 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Smarcc2Q6PDG5 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcc2Q6PDG5 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcc2Q6PDG5 Gm5566-201ENSMUST00000116118 459 ntBASIC16.43■□□□□ 0.22
Smarcc2Q6PDG5 Gm13223-201ENSMUST00000118609 747 ntBASIC16.43■□□□□ 0.22
Smarcc2Q6PDG5 Gm6222-201ENSMUST00000120787 396 ntBASIC16.43■□□□□ 0.22
Smarcc2Q6PDG5 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcc2Q6PDG5 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcc2Q6PDG5 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC16.43■□□□□ 0.22
Smarcc2Q6PDG5 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcc2Q6PDG5 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcc2Q6PDG5 AC149588.3-201ENSMUST00000227515 150 ntBASIC16.43■□□□□ 0.22
Smarcc2Q6PDG5 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcc2Q6PDG5 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcc2Q6PDG5 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcc2Q6PDG5 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcc2Q6PDG5 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcc2Q6PDG5 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcc2Q6PDG5 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcc2Q6PDG5 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcc2Q6PDG5 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC16.43■□□□□ 0.22
Smarcc2Q6PDG5 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcc2Q6PDG5 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcc2Q6PDG5 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Smarcc2Q6PDG5 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcc2Q6PDG5 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcc2Q6PDG5 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcc2Q6PDG5 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcc2Q6PDG5 Gm37019-201ENSMUST00000192133 2134 ntBASIC16.42■□□□□ 0.22
Smarcc2Q6PDG5 Gm12020-201ENSMUST00000119030 2042 ntBASIC16.42■□□□□ 0.22
Smarcc2Q6PDG5 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcc2Q6PDG5 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC16.42■□□□□ 0.22
Smarcc2Q6PDG5 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcc2Q6PDG5 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC16.42■□□□□ 0.22
Smarcc2Q6PDG5 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Smarcc2Q6PDG5 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Smarcc2Q6PDG5 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcc2Q6PDG5 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Smarcc2Q6PDG5 Gm15889-202ENSMUST00000212669 2443 ntBASIC16.42■□□□□ 0.22
Smarcc2Q6PDG5 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcc2Q6PDG5 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcc2Q6PDG5 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcc2Q6PDG5 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
Smarcc2Q6PDG5 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Smarcc2Q6PDG5 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcc2Q6PDG5 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
Smarcc2Q6PDG5 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcc2Q6PDG5 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcc2Q6PDG5 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Smarcc2Q6PDG5 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcc2Q6PDG5 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcc2Q6PDG5 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcc2Q6PDG5 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcc2Q6PDG5 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcc2Q6PDG5 Gm24543-201ENSMUST00000103867 82 ntBASIC16.41■□□□□ 0.22
Smarcc2Q6PDG5 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcc2Q6PDG5 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Smarcc2Q6PDG5 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC16.41■□□□□ 0.22
Smarcc2Q6PDG5 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcc2Q6PDG5 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC16.41■□□□□ 0.22
Smarcc2Q6PDG5 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Smarcc2Q6PDG5 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcc2Q6PDG5 Gm27631-201ENSMUST00000184163 466 ntBASIC16.41■□□□□ 0.22
Smarcc2Q6PDG5 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC16.41■□□□□ 0.22
Smarcc2Q6PDG5 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC16.41■□□□□ 0.22
Smarcc2Q6PDG5 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcc2Q6PDG5 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Smarcc2Q6PDG5 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcc2Q6PDG5 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcc2Q6PDG5 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcc2Q6PDG5 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcc2Q6PDG5 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Smarcc2Q6PDG5 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcc2Q6PDG5 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcc2Q6PDG5 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcc2Q6PDG5 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcc2Q6PDG5 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcc2Q6PDG5 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcc2Q6PDG5 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC16.4■□□□□ 0.22
Smarcc2Q6PDG5 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcc2Q6PDG5 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC16.4■□□□□ 0.22
Smarcc2Q6PDG5 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcc2Q6PDG5 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcc2Q6PDG5 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcc2Q6PDG5 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcc2Q6PDG5 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcc2Q6PDG5 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Smarcc2Q6PDG5 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcc2Q6PDG5 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Smarcc2Q6PDG5 Gm13453-201ENSMUST00000118708 357 ntBASIC16.4■□□□□ 0.22
Smarcc2Q6PDG5 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcc2Q6PDG5 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcc2Q6PDG5 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms