Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Sp140Q6NSQ5 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sp140Q6NSQ5 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sp140Q6NSQ5 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sp140Q6NSQ5 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.3□□□□□ -0.12
Sp140Q6NSQ5 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Sp140Q6NSQ5 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Sp140Q6NSQ5 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sp140Q6NSQ5 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
Sp140Q6NSQ5 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Sp140Q6NSQ5 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sp140Q6NSQ5 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sp140Q6NSQ5 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.3□□□□□ -0.12
Sp140Q6NSQ5 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Sp140Q6NSQ5 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Gm22065-201ENSMUST00000103753 110 ntBASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Gm22066-201ENSMUST00000103761 110 ntBASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Gm24932-201ENSMUST00000103763 110 ntBASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Gm24115-201ENSMUST00000103799 110 ntBASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Gm22190-201ENSMUST00000103827 110 ntBASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Gm22191-201ENSMUST00000103831 110 ntBASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Gm24721-201ENSMUST00000103849 110 ntBASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Gm28018-201ENSMUST00000103869 110 ntBASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Gm26399-201ENSMUST00000103937 110 ntBASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Gm25349-201ENSMUST00000177728 110 ntBASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Gm23616-201ENSMUST00000177797 110 ntBASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Gm25871-201ENSMUST00000177816 110 ntBASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Gm24752-201ENSMUST00000178240 110 ntBASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Gm24496-201ENSMUST00000178287 110 ntBASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Gm25649-201ENSMUST00000178476 110 ntBASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Gm25548-201ENSMUST00000178681 110 ntBASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Gm23147-201ENSMUST00000178841 110 ntBASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Gm26095-201ENSMUST00000179270 110 ntBASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Gm22171-201ENSMUST00000179283 110 ntBASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Gm23936-201ENSMUST00000179354 110 ntBASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Gm22619-201ENSMUST00000179516 110 ntBASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Gm25255-201ENSMUST00000179579 110 ntBASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Gm24755-201ENSMUST00000179691 110 ntBASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Gm26506-201ENSMUST00000179692 110 ntBASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Gm25086-201ENSMUST00000179931 110 ntBASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Gm23243-201ENSMUST00000180047 110 ntBASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Gm24659-201ENSMUST00000180212 110 ntBASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Gm24169-201ENSMUST00000180244 110 ntBASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Gm23689-201ENSMUST00000180354 110 ntBASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Gm27359-201ENSMUST00000184153 110 ntBASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Gm27785-201ENSMUST00000184268 110 ntBASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Gm27466-201ENSMUST00000184396 110 ntBASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Gm27703-201ENSMUST00000184836 110 ntBASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sp140Q6NSQ5 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sp140Q6NSQ5 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sp140Q6NSQ5 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sp140Q6NSQ5 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.28□□□□□ -0.12
Sp140Q6NSQ5 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sp140Q6NSQ5 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sp140Q6NSQ5 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Sp140Q6NSQ5 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sp140Q6NSQ5 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sp140Q6NSQ5 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sp140Q6NSQ5 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sp140Q6NSQ5 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sp140Q6NSQ5 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sp140Q6NSQ5 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sp140Q6NSQ5 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sp140Q6NSQ5 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sp140Q6NSQ5 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.28□□□□□ -0.12
Sp140Q6NSQ5 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Sp140Q6NSQ5 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Sp140Q6NSQ5 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sp140Q6NSQ5 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sp140Q6NSQ5 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Sp140Q6NSQ5 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sp140Q6NSQ5 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms