Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rai1Q61818 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rai1Q61818 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rai1Q61818 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rai1Q61818 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.4□□□□□ -0.26
Rai1Q61818 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rai1Q61818 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rai1Q61818 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rai1Q61818 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rai1Q61818 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.4□□□□□ -0.26
Rai1Q61818 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rai1Q61818 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.4□□□□□ -0.26
Rai1Q61818 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rai1Q61818 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Rai1Q61818 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rai1Q61818 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rai1Q61818 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rai1Q61818 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rai1Q61818 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.4□□□□□ -0.26
Rai1Q61818 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rai1Q61818 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rai1Q61818 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rai1Q61818 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Rai1Q61818 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.4□□□□□ -0.26
Rai1Q61818 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.4□□□□□ -0.26
Rai1Q61818 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.4□□□□□ -0.26
Rai1Q61818 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.4□□□□□ -0.26
Rai1Q61818 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rai1Q61818 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Rai1Q61818 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rai1Q61818 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Rai1Q61818 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rai1Q61818 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rai1Q61818 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rai1Q61818 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rai1Q61818 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.39□□□□□ -0.27
Rai1Q61818 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rai1Q61818 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Rai1Q61818 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rai1Q61818 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Rai1Q61818 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rai1Q61818 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rai1Q61818 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.39□□□□□ -0.27
Rai1Q61818 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rai1Q61818 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rai1Q61818 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rai1Q61818 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rai1Q61818 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rai1Q61818 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rai1Q61818 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rai1Q61818 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rai1Q61818 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.39□□□□□ -0.27
Rai1Q61818 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rai1Q61818 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.39□□□□□ -0.27
Rai1Q61818 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.39□□□□□ -0.27
Rai1Q61818 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.39□□□□□ -0.27
Rai1Q61818 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rai1Q61818 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rai1Q61818 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.39□□□□□ -0.27
Rai1Q61818 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.39□□□□□ -0.27
Rai1Q61818 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rai1Q61818 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rai1Q61818 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rai1Q61818 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
Rai1Q61818 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rai1Q61818 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rai1Q61818 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Rai1Q61818 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rai1Q61818 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rai1Q61818 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rai1Q61818 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.39□□□□□ -0.27
Rai1Q61818 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.38□□□□□ -0.27
Rai1Q61818 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rai1Q61818 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rai1Q61818 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rai1Q61818 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
Rai1Q61818 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.38□□□□□ -0.27
Rai1Q61818 Gm11793-201ENSMUST00000120433 981 ntBASIC13.38□□□□□ -0.27
Rai1Q61818 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC13.38□□□□□ -0.27
Rai1Q61818 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.38□□□□□ -0.27
Rai1Q61818 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rai1Q61818 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rai1Q61818 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rai1Q61818 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rai1Q61818 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Rai1Q61818 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Rai1Q61818 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rai1Q61818 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rai1Q61818 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Rai1Q61818 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rai1Q61818 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rai1Q61818 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rai1Q61818 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rai1Q61818 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rai1Q61818 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rai1Q61818 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.38□□□□□ -0.27
Rai1Q61818 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rai1Q61818 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.38□□□□□ -0.27
Rai1Q61818 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rai1Q61818 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms