Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Gm11675-201ENSMUST00000121873 832 ntBASIC18.55■□□□□ 0.56
Gli3Q61602 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC18.55■□□□□ 0.56
Gli3Q61602 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gli3Q61602 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC18.55■□□□□ 0.56
Gli3Q61602 Gm18734-201ENSMUST00000172937 808 ntBASIC18.55■□□□□ 0.56
Gli3Q61602 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Gli3Q61602 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC18.55■□□□□ 0.56
Gli3Q61602 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC18.55■□□□□ 0.56
Gli3Q61602 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC18.55■□□□□ 0.56
Gli3Q61602 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gli3Q61602 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gli3Q61602 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC18.55■□□□□ 0.56
Gli3Q61602 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gli3Q61602 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC18.55■□□□□ 0.56
Gli3Q61602 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gli3Q61602 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gli3Q61602 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gli3Q61602 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.55■□□□□ 0.56
Gli3Q61602 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gli3Q61602 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC18.55■□□□□ 0.56
Gli3Q61602 Gm13611-201ENSMUST00000118269 318 ntBASIC18.55■□□□□ 0.56
Gli3Q61602 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gli3Q61602 Gm26361-201ENSMUST00000158868 186 ntBASIC18.55■□□□□ 0.56
Gli3Q61602 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Gli3Q61602 Gm32025-201ENSMUST00000217960 307 ntBASIC18.55■□□□□ 0.56
Gli3Q61602 Spcs1-203ENSMUST00000226374 592 ntBASIC18.55■□□□□ 0.56
Gli3Q61602 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gli3Q61602 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC18.54■□□□□ 0.56
Gli3Q61602 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC18.54■□□□□ 0.56
Gli3Q61602 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gli3Q61602 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Gli3Q61602 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Gli3Q61602 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC18.54■□□□□ 0.56
Gli3Q61602 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gli3Q61602 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Gli3Q61602 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Gli3Q61602 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC18.54■□□□□ 0.56
Gli3Q61602 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC18.54■□□□□ 0.56
Gli3Q61602 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gli3Q61602 AC121801.1-201ENSMUST00000225363 1899 ntBASIC18.53■□□□□ 0.56
Gli3Q61602 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC18.53■□□□□ 0.56
Gli3Q61602 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Gli3Q61602 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gli3Q61602 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
Gli3Q61602 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gli3Q61602 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gli3Q61602 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gli3Q61602 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gli3Q61602 Gm18893-201ENSMUST00000198416 943 ntBASIC18.53■□□□□ 0.56
Gli3Q61602 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Gli3Q61602 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Gli3Q61602 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gli3Q61602 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gli3Q61602 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gli3Q61602 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gli3Q61602 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.52■□□□□ 0.56
Gli3Q61602 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Gli3Q61602 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gli3Q61602 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gli3Q61602 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gli3Q61602 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Gli3Q61602 Gm16397-201ENSMUST00000122201 494 ntBASIC18.52■□□□□ 0.56
Gli3Q61602 Gm27552-201ENSMUST00000183351 62 ntBASIC18.52■□□□□ 0.56
Gli3Q61602 Gm27844-201ENSMUST00000183613 62 ntBASIC18.52■□□□□ 0.56
Gli3Q61602 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC18.52■□□□□ 0.56
Gli3Q61602 Ighv5-7-201ENSMUST00000192302 244 ntBASIC18.52■□□□□ 0.56
Gli3Q61602 Gm8365-201ENSMUST00000197334 648 ntBASIC18.52■□□□□ 0.56
Gli3Q61602 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Gli3Q61602 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC18.52■□□□□ 0.56
Gli3Q61602 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC18.52■□□□□ 0.56
Gli3Q61602 AC154222.2-201ENSMUST00000225848 607 ntBASIC18.52■□□□□ 0.56
Gli3Q61602 AC161537.1-201ENSMUST00000226199 1015 ntBASIC18.52■□□□□ 0.56
Gli3Q61602 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Gli3Q61602 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gli3Q61602 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gli3Q61602 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gli3Q61602 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gli3Q61602 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Gli3Q61602 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.55
Gli3Q61602 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Gli3Q61602 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Gli3Q61602 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Gli3Q61602 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Gli3Q61602 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Gli3Q61602 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Gli3Q61602 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC18.51■□□□□ 0.55
Gli3Q61602 Gm26185-201ENSMUST00000157692 266 ntBASIC18.51■□□□□ 0.55
Gli3Q61602 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Gli3Q61602 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Gli3Q61602 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Gli3Q61602 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Gli3Q61602 AC132901.1-201ENSMUST00000224345 508 ntBASIC18.51■□□□□ 0.55
Gli3Q61602 AC099645.1-201ENSMUST00000226476 1105 ntBASIC18.51■□□□□ 0.55
Gli3Q61602 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Gli3Q61602 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gli3Q61602 Gm10179-201ENSMUST00000086233 688 ntBASIC18.51■□□□□ 0.55
Gli3Q61602 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Gli3Q61602 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gli3Q61602 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gli3Q61602 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms