Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a4Q60857 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a4Q60857 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Slc6a4Q60857 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.4□□□□□ -0.1
Slc6a4Q60857 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Slc6a4Q60857 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.4□□□□□ -0.1
Slc6a4Q60857 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a4Q60857 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a4Q60857 Gm15240-201ENSMUST00000118156 720 ntBASIC14.4□□□□□ -0.1
Slc6a4Q60857 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.4□□□□□ -0.1
Slc6a4Q60857 Gm9794-201ENSMUST00000202370 423 ntBASIC14.4□□□□□ -0.1
Slc6a4Q60857 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a4Q60857 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a4Q60857 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Slc6a4Q60857 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a4Q60857 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a4Q60857 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a4Q60857 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a4Q60857 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a4Q60857 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a4Q60857 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.4□□□□□ -0.1
Slc6a4Q60857 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a4Q60857 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a4Q60857 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a4Q60857 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Slc6a4Q60857 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Slc6a4Q60857 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.11
Slc6a4Q60857 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.39□□□□□ -0.11
Slc6a4Q60857 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a4Q60857 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a4Q60857 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Slc6a4Q60857 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Slc6a4Q60857 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a4Q60857 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a4Q60857 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a4Q60857 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a4Q60857 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a4Q60857 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a4Q60857 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a4Q60857 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Slc6a4Q60857 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Slc6a4Q60857 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Slc6a4Q60857 Gm6912-201ENSMUST00000117218 544 ntBASIC14.39□□□□□ -0.11
Slc6a4Q60857 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.39□□□□□ -0.11
Slc6a4Q60857 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a4Q60857 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a4Q60857 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.39□□□□□ -0.11
Slc6a4Q60857 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.39□□□□□ -0.11
Slc6a4Q60857 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Slc6a4Q60857 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a4Q60857 Gm45668-201ENSMUST00000211271 493 ntBASIC14.39□□□□□ -0.11
Slc6a4Q60857 Gm18624-201ENSMUST00000220966 658 ntBASIC14.39□□□□□ -0.11
Slc6a4Q60857 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Slc6a4Q60857 Mir497b-201ENSMUST00000093601 125 ntBASIC14.39□□□□□ -0.11
Slc6a4Q60857 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a4Q60857 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a4Q60857 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a4Q60857 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a4Q60857 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Slc6a4Q60857 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.39□□□□□ -0.11
Slc6a4Q60857 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a4Q60857 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Slc6a4Q60857 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a4Q60857 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.39□□□□□ -0.11
Slc6a4Q60857 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a4Q60857 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a4Q60857 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Slc6a4Q60857 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a4Q60857 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a4Q60857 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Slc6a4Q60857 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a4Q60857 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Slc6a4Q60857 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a4Q60857 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a4Q60857 Gm12490-201ENSMUST00000120255 560 ntBASIC14.38□□□□□ -0.11
Slc6a4Q60857 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a4Q60857 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.38□□□□□ -0.11
Slc6a4Q60857 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a4Q60857 Gm6745-201ENSMUST00000199216 526 ntBASIC14.38□□□□□ -0.11
Slc6a4Q60857 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.38□□□□□ -0.11
Slc6a4Q60857 Gm7653-201ENSMUST00000214567 508 ntBASIC14.38□□□□□ -0.11
Slc6a4Q60857 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.38□□□□□ -0.11
Slc6a4Q60857 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.38□□□□□ -0.11
Slc6a4Q60857 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a4Q60857 Gm15823-201ENSMUST00000064305 670 ntBASIC14.38□□□□□ -0.11
Slc6a4Q60857 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a4Q60857 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a4Q60857 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a4Q60857 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a4Q60857 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a4Q60857 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a4Q60857 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a4Q60857 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a4Q60857 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a4Q60857 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Slc6a4Q60857 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc6a4Q60857 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc6a4Q60857 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc6a4Q60857 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Slc6a4Q60857 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms