Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Nr1h4Q60641 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.42□□□□□ -0.26
Nr1h4Q60641 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nr1h4Q60641 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Nr1h4Q60641 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Nr1h4Q60641 Gm13884-201ENSMUST00000118103 829 ntBASIC13.42□□□□□ -0.26
Nr1h4Q60641 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.42□□□□□ -0.26
Nr1h4Q60641 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Nr1h4Q60641 Gm17971-201ENSMUST00000190239 806 ntBASIC13.42□□□□□ -0.26
Nr1h4Q60641 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Nr1h4Q60641 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nr1h4Q60641 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nr1h4Q60641 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nr1h4Q60641 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nr1h4Q60641 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nr1h4Q60641 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nr1h4Q60641 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nr1h4Q60641 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nr1h4Q60641 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.42□□□□□ -0.26
Nr1h4Q60641 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nr1h4Q60641 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nr1h4Q60641 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Nr1h4Q60641 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nr1h4Q60641 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nr1h4Q60641 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nr1h4Q60641 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.42□□□□□ -0.26
Nr1h4Q60641 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nr1h4Q60641 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nr1h4Q60641 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nr1h4Q60641 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nr1h4Q60641 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nr1h4Q60641 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nr1h4Q60641 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nr1h4Q60641 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nr1h4Q60641 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nr1h4Q60641 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nr1h4Q60641 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nr1h4Q60641 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.41□□□□□ -0.26
Nr1h4Q60641 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nr1h4Q60641 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nr1h4Q60641 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.41□□□□□ -0.26
Nr1h4Q60641 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nr1h4Q60641 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nr1h4Q60641 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nr1h4Q60641 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Nr1h4Q60641 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nr1h4Q60641 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nr1h4Q60641 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nr1h4Q60641 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Nr1h4Q60641 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.41□□□□□ -0.26
Nr1h4Q60641 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nr1h4Q60641 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nr1h4Q60641 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nr1h4Q60641 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.4□□□□□ -0.26
Nr1h4Q60641 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nr1h4Q60641 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nr1h4Q60641 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Nr1h4Q60641 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nr1h4Q60641 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13.4□□□□□ -0.26
Nr1h4Q60641 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Nr1h4Q60641 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.4□□□□□ -0.26
Nr1h4Q60641 Mir5131-201ENSMUST00000175426 93 ntBASIC13.4□□□□□ -0.26
Nr1h4Q60641 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nr1h4Q60641 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.4□□□□□ -0.26
Nr1h4Q60641 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.4□□□□□ -0.26
Nr1h4Q60641 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Nr1h4Q60641 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.4□□□□□ -0.26
Nr1h4Q60641 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nr1h4Q60641 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nr1h4Q60641 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nr1h4Q60641 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Nr1h4Q60641 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Nr1h4Q60641 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.4□□□□□ -0.26
Nr1h4Q60641 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nr1h4Q60641 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.4□□□□□ -0.26
Nr1h4Q60641 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nr1h4Q60641 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nr1h4Q60641 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.4□□□□□ -0.26
Nr1h4Q60641 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nr1h4Q60641 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Nr1h4Q60641 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.4□□□□□ -0.27
Nr1h4Q60641 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.4□□□□□ -0.27
Nr1h4Q60641 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Nr1h4Q60641 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Nr1h4Q60641 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nr1h4Q60641 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.39□□□□□ -0.27
Nr1h4Q60641 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nr1h4Q60641 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.39□□□□□ -0.27
Nr1h4Q60641 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nr1h4Q60641 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nr1h4Q60641 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Nr1h4Q60641 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.39□□□□□ -0.27
Nr1h4Q60641 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.39□□□□□ -0.27
Nr1h4Q60641 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nr1h4Q60641 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nr1h4Q60641 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nr1h4Q60641 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nr1h4Q60641 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.39□□□□□ -0.27
Nr1h4Q60641 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nr1h4Q60641 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms