Protein–RNA interactions for Protein: Q52KI8

Srrm1, Serine/arginine repetitive matrix protein 1, mousemouse

Known RBP Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm1Q52KI8 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Srrm1Q52KI8 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Srrm1Q52KI8 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Srrm1Q52KI8 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Srrm1Q52KI8 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Srrm1Q52KI8 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Srrm1Q52KI8 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Srrm1Q52KI8 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Srrm1Q52KI8 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Srrm1Q52KI8 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Srrm1Q52KI8 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Srrm1Q52KI8 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Srrm1Q52KI8 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Srrm1Q52KI8 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.74■□□□□ 0.11
Srrm1Q52KI8 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Srrm1Q52KI8 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Srrm1Q52KI8 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Srrm1Q52KI8 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC15.74■□□□□ 0.11
Srrm1Q52KI8 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC15.74■□□□□ 0.11
Srrm1Q52KI8 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC15.74■□□□□ 0.11
Srrm1Q52KI8 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Srrm1Q52KI8 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Srrm1Q52KI8 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC15.74■□□□□ 0.11
Srrm1Q52KI8 Gm19078-201ENSMUST00000206311 727 ntBASIC15.74■□□□□ 0.11
Srrm1Q52KI8 Gm7172-201ENSMUST00000218047 1152 ntBASIC15.74■□□□□ 0.11
Srrm1Q52KI8 CU024892.2-201ENSMUST00000224608 832 ntBASIC15.74■□□□□ 0.11
Srrm1Q52KI8 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Srrm1Q52KI8 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Srrm1Q52KI8 Gm9823-201ENSMUST00000051212 327 ntBASIC15.74■□□□□ 0.11
Srrm1Q52KI8 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Srrm1Q52KI8 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Srrm1Q52KI8 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Srrm1Q52KI8 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Srrm1Q52KI8 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Srrm1Q52KI8 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Srrm1Q52KI8 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Srrm1Q52KI8 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Srrm1Q52KI8 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Srrm1Q52KI8 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Srrm1Q52KI8 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Srrm1Q52KI8 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Srrm1Q52KI8 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Srrm1Q52KI8 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Srrm1Q52KI8 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.74■□□□□ 0.11
Srrm1Q52KI8 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Srrm1Q52KI8 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Srrm1Q52KI8 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Srrm1Q52KI8 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Srrm1Q52KI8 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Srrm1Q52KI8 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Srrm1Q52KI8 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC15.73■□□□□ 0.11
Srrm1Q52KI8 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Srrm1Q52KI8 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.73■□□□□ 0.11
Srrm1Q52KI8 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.73■□□□□ 0.11
Srrm1Q52KI8 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Srrm1Q52KI8 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC15.73■□□□□ 0.11
Srrm1Q52KI8 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Srrm1Q52KI8 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Srrm1Q52KI8 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC15.73■□□□□ 0.11
Srrm1Q52KI8 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC15.73■□□□□ 0.11
Srrm1Q52KI8 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Srrm1Q52KI8 Mir3102-201ENSMUST00000175555 104 ntBASIC15.73■□□□□ 0.11
Srrm1Q52KI8 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Srrm1Q52KI8 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC15.73■□□□□ 0.11
Srrm1Q52KI8 Gm4959-201ENSMUST00000197271 1044 ntBASIC15.73■□□□□ 0.11
Srrm1Q52KI8 AC125117.1-201ENSMUST00000228121 468 ntBASIC15.73■□□□□ 0.11
Srrm1Q52KI8 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Srrm1Q52KI8 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Srrm1Q52KI8 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Srrm1Q52KI8 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Srrm1Q52KI8 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Srrm1Q52KI8 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Srrm1Q52KI8 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.73■□□□□ 0.11
Srrm1Q52KI8 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Srrm1Q52KI8 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Srrm1Q52KI8 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Srrm1Q52KI8 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Srrm1Q52KI8 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Srrm1Q52KI8 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Srrm1Q52KI8 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Srrm1Q52KI8 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Srrm1Q52KI8 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Srrm1Q52KI8 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Srrm1Q52KI8 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Srrm1Q52KI8 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Srrm1Q52KI8 Gm15957-201ENSMUST00000118893 974 ntBASIC15.72■□□□□ 0.11
Srrm1Q52KI8 Gm12416-201ENSMUST00000120911 1008 ntBASIC15.72■□□□□ 0.11
Srrm1Q52KI8 Gm12882-201ENSMUST00000121696 517 ntBASIC15.72■□□□□ 0.11
Srrm1Q52KI8 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC15.72■□□□□ 0.11
Srrm1Q52KI8 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC15.72■□□□□ 0.11
Srrm1Q52KI8 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC15.72■□□□□ 0.11
Srrm1Q52KI8 Gm38241-201ENSMUST00000192641 898 ntBASIC15.72■□□□□ 0.11
Srrm1Q52KI8 Gm42442-201ENSMUST00000197951 1133 ntBASIC15.72■□□□□ 0.11
Srrm1Q52KI8 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Srrm1Q52KI8 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC15.72■□□□□ 0.11
Srrm1Q52KI8 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC15.72■□□□□ 0.11
Srrm1Q52KI8 AC126253.1-201ENSMUST00000227974 824 ntBASIC15.72■□□□□ 0.11
Srrm1Q52KI8 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Srrm1Q52KI8 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Srrm1Q52KI8 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms