Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf38aQ4FK66 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf38aQ4FK66 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf38aQ4FK66 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf38aQ4FK66 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf38aQ4FK66 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf38aQ4FK66 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Prpf38aQ4FK66 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf38aQ4FK66 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf38aQ4FK66 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf38aQ4FK66 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf38aQ4FK66 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf38aQ4FK66 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Prpf38aQ4FK66 AC159196.2-201ENSMUST00000224082 1622 ntBASIC16.41■□□□□ 0.22
Prpf38aQ4FK66 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf38aQ4FK66 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf38aQ4FK66 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf38aQ4FK66 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Prpf38aQ4FK66 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf38aQ4FK66 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf38aQ4FK66 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf38aQ4FK66 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf38aQ4FK66 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf38aQ4FK66 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf38aQ4FK66 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf38aQ4FK66 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Prpf38aQ4FK66 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Prpf38aQ4FK66 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf38aQ4FK66 Gm11918-201ENSMUST00000121660 179 ntBASIC16.4■□□□□ 0.22
Prpf38aQ4FK66 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Prpf38aQ4FK66 Gm7558-201ENSMUST00000193221 1165 ntBASIC16.4■□□□□ 0.22
Prpf38aQ4FK66 Gm45059-201ENSMUST00000205558 1077 ntBASIC16.4■□□□□ 0.22
Prpf38aQ4FK66 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf38aQ4FK66 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf38aQ4FK66 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf38aQ4FK66 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Prpf38aQ4FK66 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf38aQ4FK66 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf38aQ4FK66 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf38aQ4FK66 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf38aQ4FK66 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Prpf38aQ4FK66 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Prpf38aQ4FK66 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Prpf38aQ4FK66 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Prpf38aQ4FK66 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf38aQ4FK66 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf38aQ4FK66 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf38aQ4FK66 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Prpf38aQ4FK66 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Prpf38aQ4FK66 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf38aQ4FK66 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf38aQ4FK66 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Prpf38aQ4FK66 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC16.39■□□□□ 0.21
Prpf38aQ4FK66 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf38aQ4FK66 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf38aQ4FK66 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Prpf38aQ4FK66 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf38aQ4FK66 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC16.39■□□□□ 0.21
Prpf38aQ4FK66 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.39■□□□□ 0.21
Prpf38aQ4FK66 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Prpf38aQ4FK66 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf38aQ4FK66 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf38aQ4FK66 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC16.39■□□□□ 0.21
Prpf38aQ4FK66 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC16.39■□□□□ 0.21
Prpf38aQ4FK66 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC16.39■□□□□ 0.21
Prpf38aQ4FK66 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf38aQ4FK66 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf38aQ4FK66 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf38aQ4FK66 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC16.39■□□□□ 0.21
Prpf38aQ4FK66 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf38aQ4FK66 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Prpf38aQ4FK66 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf38aQ4FK66 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf38aQ4FK66 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf38aQ4FK66 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Prpf38aQ4FK66 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf38aQ4FK66 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf38aQ4FK66 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf38aQ4FK66 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf38aQ4FK66 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf38aQ4FK66 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf38aQ4FK66 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC16.38■□□□□ 0.21
Prpf38aQ4FK66 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf38aQ4FK66 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf38aQ4FK66 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf38aQ4FK66 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf38aQ4FK66 Gm11478-201ENSMUST00000117851 599 ntBASIC16.38■□□□□ 0.21
Prpf38aQ4FK66 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf38aQ4FK66 Gm24420-201ENSMUST00000176676 59 ntBASIC16.38■□□□□ 0.21
Prpf38aQ4FK66 Mir7654-201ENSMUST00000185082 70 ntBASIC16.38■□□□□ 0.21
Prpf38aQ4FK66 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC16.38■□□□□ 0.21
Prpf38aQ4FK66 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf38aQ4FK66 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC16.38■□□□□ 0.21
Prpf38aQ4FK66 AC155258.1-201ENSMUST00000219303 253 ntBASIC16.38■□□□□ 0.21
Prpf38aQ4FK66 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC16.38■□□□□ 0.21
Prpf38aQ4FK66 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.38■□□□□ 0.21
Prpf38aQ4FK66 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf38aQ4FK66 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf38aQ4FK66 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Prpf38aQ4FK66 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms