Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 AC113441.2-201ENSMUST00000221538 1468 ntBASIC17.14■□□□□ 0.33
Shank3Q4ACU6 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shank3Q4ACU6 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shank3Q4ACU6 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shank3Q4ACU6 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shank3Q4ACU6 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shank3Q4ACU6 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shank3Q4ACU6 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC17.13■□□□□ 0.33
Shank3Q4ACU6 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC17.13■□□□□ 0.33
Shank3Q4ACU6 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Shank3Q4ACU6 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shank3Q4ACU6 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shank3Q4ACU6 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shank3Q4ACU6 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Shank3Q4ACU6 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shank3Q4ACU6 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC17.13■□□□□ 0.33
Shank3Q4ACU6 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Shank3Q4ACU6 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Shank3Q4ACU6 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shank3Q4ACU6 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shank3Q4ACU6 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shank3Q4ACU6 Gm16202-201ENSMUST00000117532 544 ntBASIC17.13■□□□□ 0.33
Shank3Q4ACU6 Gm11964-201ENSMUST00000120982 444 ntBASIC17.13■□□□□ 0.33
Shank3Q4ACU6 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Shank3Q4ACU6 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC17.13■□□□□ 0.33
Shank3Q4ACU6 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC17.13■□□□□ 0.33
Shank3Q4ACU6 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC17.13■□□□□ 0.33
Shank3Q4ACU6 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC17.13■□□□□ 0.33
Shank3Q4ACU6 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shank3Q4ACU6 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Shank3Q4ACU6 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Shank3Q4ACU6 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shank3Q4ACU6 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Shank3Q4ACU6 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Shank3Q4ACU6 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shank3Q4ACU6 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shank3Q4ACU6 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shank3Q4ACU6 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shank3Q4ACU6 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC17.12■□□□□ 0.33
Shank3Q4ACU6 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Shank3Q4ACU6 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.12■□□□□ 0.33
Shank3Q4ACU6 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shank3Q4ACU6 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC17.12■□□□□ 0.33
Shank3Q4ACU6 Gm20482-202ENSMUST00000174729 825 ntBASIC17.12■□□□□ 0.33
Shank3Q4ACU6 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC17.12■□□□□ 0.33
Shank3Q4ACU6 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Shank3Q4ACU6 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shank3Q4ACU6 Mir433-201ENSMUST00000093564 124 ntBASIC17.12■□□□□ 0.33
Shank3Q4ACU6 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shank3Q4ACU6 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shank3Q4ACU6 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Shank3Q4ACU6 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Shank3Q4ACU6 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shank3Q4ACU6 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Shank3Q4ACU6 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shank3Q4ACU6 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shank3Q4ACU6 Gm38197-201ENSMUST00000192320 2122 ntBASIC17.11■□□□□ 0.33
Shank3Q4ACU6 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shank3Q4ACU6 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Shank3Q4ACU6 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shank3Q4ACU6 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC17.11■□□□□ 0.33
Shank3Q4ACU6 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shank3Q4ACU6 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Shank3Q4ACU6 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shank3Q4ACU6 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Shank3Q4ACU6 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Shank3Q4ACU6 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Shank3Q4ACU6 Gm27341-201ENSMUST00000183570 106 ntBASIC17.11■□□□□ 0.33
Shank3Q4ACU6 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shank3Q4ACU6 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shank3Q4ACU6 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Shank3Q4ACU6 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shank3Q4ACU6 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shank3Q4ACU6 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Shank3Q4ACU6 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC17.11■□□□□ 0.33
Shank3Q4ACU6 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shank3Q4ACU6 Gm43423-201ENSMUST00000198390 2094 ntBASIC17.11■□□□□ 0.33
Shank3Q4ACU6 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Shank3Q4ACU6 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shank3Q4ACU6 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shank3Q4ACU6 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC17.11■□□□□ 0.33
Shank3Q4ACU6 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Shank3Q4ACU6 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shank3Q4ACU6 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shank3Q4ACU6 Gm13461-201ENSMUST00000120980 662 ntBASIC17.1■□□□□ 0.33
Shank3Q4ACU6 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Shank3Q4ACU6 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Shank3Q4ACU6 Gm43138-201ENSMUST00000199123 708 ntBASIC17.1■□□□□ 0.33
Shank3Q4ACU6 Gm45186-201ENSMUST00000206874 478 ntBASIC17.1■□□□□ 0.33
Shank3Q4ACU6 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC17.1■□□□□ 0.33
Shank3Q4ACU6 Gm10608-202ENSMUST00000213924 676 ntBASIC17.1■□□□□ 0.33
Shank3Q4ACU6 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shank3Q4ACU6 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Shank3Q4ACU6 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shank3Q4ACU6 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Shank3Q4ACU6 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shank3Q4ACU6 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Shank3Q4ACU6 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shank3Q4ACU6 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shank3Q4ACU6 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms