Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim80Q3V061 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim80Q3V061 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.58□□□□□ -0.08
Trim80Q3V061 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim80Q3V061 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim80Q3V061 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trim80Q3V061 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim80Q3V061 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trim80Q3V061 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.58□□□□□ -0.08
Trim80Q3V061 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.58□□□□□ -0.08
Trim80Q3V061 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.58□□□□□ -0.08
Trim80Q3V061 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim80Q3V061 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Trim80Q3V061 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim80Q3V061 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim80Q3V061 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim80Q3V061 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trim80Q3V061 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trim80Q3V061 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Trim80Q3V061 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim80Q3V061 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim80Q3V061 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim80Q3V061 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim80Q3V061 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.58□□□□□ -0.08
Trim80Q3V061 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim80Q3V061 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim80Q3V061 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trim80Q3V061 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim80Q3V061 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim80Q3V061 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.57□□□□□ -0.08
Trim80Q3V061 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim80Q3V061 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim80Q3V061 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim80Q3V061 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim80Q3V061 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim80Q3V061 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim80Q3V061 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim80Q3V061 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim80Q3V061 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
Trim80Q3V061 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim80Q3V061 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trim80Q3V061 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Trim80Q3V061 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trim80Q3V061 Mir1895-201ENSMUST00000122615 79 ntBASIC14.57□□□□□ -0.08
Trim80Q3V061 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.57□□□□□ -0.08
Trim80Q3V061 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim80Q3V061 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim80Q3V061 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.57□□□□□ -0.08
Trim80Q3V061 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.57□□□□□ -0.08
Trim80Q3V061 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim80Q3V061 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim80Q3V061 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim80Q3V061 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim80Q3V061 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim80Q3V061 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim80Q3V061 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim80Q3V061 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim80Q3V061 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim80Q3V061 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trim80Q3V061 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim80Q3V061 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trim80Q3V061 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim80Q3V061 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim80Q3V061 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Trim80Q3V061 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim80Q3V061 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim80Q3V061 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim80Q3V061 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim80Q3V061 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim80Q3V061 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim80Q3V061 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trim80Q3V061 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim80Q3V061 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim80Q3V061 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim80Q3V061 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim80Q3V061 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim80Q3V061 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim80Q3V061 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim80Q3V061 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim80Q3V061 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim80Q3V061 Gm4899-201ENSMUST00000178708 719 ntBASIC14.56□□□□□ -0.08
Trim80Q3V061 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.56□□□□□ -0.08
Trim80Q3V061 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.56□□□□□ -0.08
Trim80Q3V061 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim80Q3V061 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim80Q3V061 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim80Q3V061 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim80Q3V061 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trim80Q3V061 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim80Q3V061 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim80Q3V061 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim80Q3V061 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim80Q3V061 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim80Q3V061 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim80Q3V061 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim80Q3V061 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim80Q3V061 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.56□□□□□ -0.08
Trim80Q3V061 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim80Q3V061 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trim80Q3V061 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms