Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.22□□□□□ -0.29
Trim40Q3UWA4 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim40Q3UWA4 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim40Q3UWA4 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim40Q3UWA4 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim40Q3UWA4 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim40Q3UWA4 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim40Q3UWA4 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trim40Q3UWA4 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim40Q3UWA4 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim40Q3UWA4 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim40Q3UWA4 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim40Q3UWA4 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.22□□□□□ -0.29
Trim40Q3UWA4 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.22□□□□□ -0.29
Trim40Q3UWA4 Gm25925-201ENSMUST00000158314 306 ntBASIC13.22□□□□□ -0.29
Trim40Q3UWA4 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trim40Q3UWA4 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trim40Q3UWA4 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.22□□□□□ -0.29
Trim40Q3UWA4 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.22□□□□□ -0.29
Trim40Q3UWA4 Gm18246-201ENSMUST00000221023 728 ntBASIC13.22□□□□□ -0.29
Trim40Q3UWA4 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.22□□□□□ -0.29
Trim40Q3UWA4 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim40Q3UWA4 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim40Q3UWA4 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim40Q3UWA4 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC13.22□□□□□ -0.29
Trim40Q3UWA4 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.22□□□□□ -0.29
Trim40Q3UWA4 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim40Q3UWA4 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.22□□□□□ -0.29
Trim40Q3UWA4 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim40Q3UWA4 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim40Q3UWA4 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim40Q3UWA4 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim40Q3UWA4 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim40Q3UWA4 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim40Q3UWA4 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim40Q3UWA4 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim40Q3UWA4 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim40Q3UWA4 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.22□□□□□ -0.29
Trim40Q3UWA4 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trim40Q3UWA4 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trim40Q3UWA4 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim40Q3UWA4 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.22□□□□□ -0.29
Trim40Q3UWA4 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim40Q3UWA4 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim40Q3UWA4 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trim40Q3UWA4 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.21□□□□□ -0.29
Trim40Q3UWA4 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.21□□□□□ -0.29
Trim40Q3UWA4 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim40Q3UWA4 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim40Q3UWA4 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim40Q3UWA4 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim40Q3UWA4 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim40Q3UWA4 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim40Q3UWA4 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim40Q3UWA4 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim40Q3UWA4 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.21□□□□□ -0.29
Trim40Q3UWA4 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim40Q3UWA4 Gm7230-201ENSMUST00000173026 815 ntBASIC13.21□□□□□ -0.29
Trim40Q3UWA4 Gm34391-201ENSMUST00000203706 907 ntBASIC13.21□□□□□ -0.29
Trim40Q3UWA4 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim40Q3UWA4 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim40Q3UWA4 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trim40Q3UWA4 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.21□□□□□ -0.29
Trim40Q3UWA4 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim40Q3UWA4 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim40Q3UWA4 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim40Q3UWA4 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trim40Q3UWA4 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim40Q3UWA4 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trim40Q3UWA4 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim40Q3UWA4 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim40Q3UWA4 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim40Q3UWA4 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.21□□□□□ -0.3
Trim40Q3UWA4 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trim40Q3UWA4 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim40Q3UWA4 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trim40Q3UWA4 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Trim40Q3UWA4 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim40Q3UWA4 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim40Q3UWA4 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trim40Q3UWA4 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim40Q3UWA4 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim40Q3UWA4 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim40Q3UWA4 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.2□□□□□ -0.3
Trim40Q3UWA4 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Trim40Q3UWA4 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim40Q3UWA4 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trim40Q3UWA4 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim40Q3UWA4 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim40Q3UWA4 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Trim40Q3UWA4 Gm9103-201ENSMUST00000119371 405 ntBASIC13.2□□□□□ -0.3
Trim40Q3UWA4 Gm15173-201ENSMUST00000122049 433 ntBASIC13.2□□□□□ -0.3
Trim40Q3UWA4 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim40Q3UWA4 Gm6550-201ENSMUST00000187574 993 ntBASIC13.2□□□□□ -0.3
Trim40Q3UWA4 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.2□□□□□ -0.3
Trim40Q3UWA4 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim40Q3UWA4 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim40Q3UWA4 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim40Q3UWA4 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim40Q3UWA4 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms