Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.76□□□□□ -0.05
Upf3aQ3ULJ3 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Upf3aQ3ULJ3 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Upf3aQ3ULJ3 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Upf3aQ3ULJ3 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Upf3aQ3ULJ3 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Upf3aQ3ULJ3 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Upf3aQ3ULJ3 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Upf3aQ3ULJ3 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.76□□□□□ -0.05
Upf3aQ3ULJ3 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.76□□□□□ -0.05
Upf3aQ3ULJ3 Gm45784-201ENSMUST00000188360 142 ntBASIC14.76□□□□□ -0.05
Upf3aQ3ULJ3 Gm6983-201ENSMUST00000214912 628 ntBASIC14.76□□□□□ -0.05
Upf3aQ3ULJ3 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.76□□□□□ -0.05
Upf3aQ3ULJ3 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Upf3aQ3ULJ3 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Upf3aQ3ULJ3 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Upf3aQ3ULJ3 Sybu-209ENSMUST00000228639 4113 ntBASIC14.76□□□□□ -0.05
Upf3aQ3ULJ3 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Upf3aQ3ULJ3 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Upf3aQ3ULJ3 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Upf3aQ3ULJ3 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Upf3aQ3ULJ3 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Upf3aQ3ULJ3 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Upf3aQ3ULJ3 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Upf3aQ3ULJ3 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Upf3aQ3ULJ3 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Upf3aQ3ULJ3 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.75□□□□□ -0.05
Upf3aQ3ULJ3 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
Upf3aQ3ULJ3 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.75□□□□□ -0.05
Upf3aQ3ULJ3 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Upf3aQ3ULJ3 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Upf3aQ3ULJ3 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Upf3aQ3ULJ3 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Upf3aQ3ULJ3 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Upf3aQ3ULJ3 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Upf3aQ3ULJ3 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Upf3aQ3ULJ3 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
Upf3aQ3ULJ3 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Upf3aQ3ULJ3 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Upf3aQ3ULJ3 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Upf3aQ3ULJ3 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Upf3aQ3ULJ3 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Upf3aQ3ULJ3 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Upf3aQ3ULJ3 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Upf3aQ3ULJ3 Gm12485-201ENSMUST00000119641 291 ntBASIC14.75□□□□□ -0.05
Upf3aQ3ULJ3 Gm27847-201ENSMUST00000183711 107 ntBASIC14.75□□□□□ -0.05
Upf3aQ3ULJ3 Gm27375-201ENSMUST00000183799 107 ntBASIC14.75□□□□□ -0.05
Upf3aQ3ULJ3 Mir6420-201ENSMUST00000185032 102 ntBASIC14.75□□□□□ -0.05
Upf3aQ3ULJ3 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.75□□□□□ -0.05
Upf3aQ3ULJ3 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.75□□□□□ -0.05
Upf3aQ3ULJ3 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Upf3aQ3ULJ3 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Upf3aQ3ULJ3 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Upf3aQ3ULJ3 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.75□□□□□ -0.05
Upf3aQ3ULJ3 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Upf3aQ3ULJ3 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Upf3aQ3ULJ3 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Upf3aQ3ULJ3 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Upf3aQ3ULJ3 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Upf3aQ3ULJ3 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Upf3aQ3ULJ3 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Upf3aQ3ULJ3 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Upf3aQ3ULJ3 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.75□□□□□ -0.05
Upf3aQ3ULJ3 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Upf3aQ3ULJ3 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Upf3aQ3ULJ3 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Upf3aQ3ULJ3 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Upf3aQ3ULJ3 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Upf3aQ3ULJ3 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Upf3aQ3ULJ3 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Upf3aQ3ULJ3 Efs-202ENSMUST00000227037 2540 ntBASIC14.74□□□□□ -0.05
Upf3aQ3ULJ3 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Upf3aQ3ULJ3 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Upf3aQ3ULJ3 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Upf3aQ3ULJ3 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Upf3aQ3ULJ3 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.74□□□□□ -0.05
Upf3aQ3ULJ3 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Upf3aQ3ULJ3 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Upf3aQ3ULJ3 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Upf3aQ3ULJ3 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.74□□□□□ -0.05
Upf3aQ3ULJ3 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.74□□□□□ -0.05
Upf3aQ3ULJ3 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Upf3aQ3ULJ3 Gm14660-201ENSMUST00000119809 575 ntBASIC14.74□□□□□ -0.05
Upf3aQ3ULJ3 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Upf3aQ3ULJ3 Snora78-201ENSMUST00000158630 128 ntBASIC14.74□□□□□ -0.05
Upf3aQ3ULJ3 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Upf3aQ3ULJ3 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.74□□□□□ -0.05
Upf3aQ3ULJ3 Gm10012-201ENSMUST00000078252 192 ntBASIC14.74□□□□□ -0.05
Upf3aQ3ULJ3 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Upf3aQ3ULJ3 Gm6091-201ENSMUST00000098307 165 ntBASIC14.74□□□□□ -0.05
Upf3aQ3ULJ3 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Upf3aQ3ULJ3 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Upf3aQ3ULJ3 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Upf3aQ3ULJ3 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.74□□□□□ -0.05
Upf3aQ3ULJ3 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Upf3aQ3ULJ3 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Upf3aQ3ULJ3 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Upf3aQ3ULJ3 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Upf3aQ3ULJ3 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Upf3aQ3ULJ3 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms