Protein–RNA interactions for Protein: Q3UEB3

Puf60, Poly(U)-binding-splicing factor PUF60, mousemouse

Known RBP Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Puf60Q3UEB3 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Puf60Q3UEB3 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Puf60Q3UEB3 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Puf60Q3UEB3 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC19.21■□□□□ 0.67
Puf60Q3UEB3 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Puf60Q3UEB3 Gm38671-201ENSMUST00000200573 130 ntBASIC19.21■□□□□ 0.67
Puf60Q3UEB3 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC19.21■□□□□ 0.67
Puf60Q3UEB3 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Puf60Q3UEB3 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Puf60Q3UEB3 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Puf60Q3UEB3 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC19.21■□□□□ 0.67
Puf60Q3UEB3 Gm38102-201ENSMUST00000192791 1935 ntBASIC19.21■□□□□ 0.67
Puf60Q3UEB3 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Puf60Q3UEB3 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Puf60Q3UEB3 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Puf60Q3UEB3 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Puf60Q3UEB3 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Puf60Q3UEB3 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Puf60Q3UEB3 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Puf60Q3UEB3 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
Puf60Q3UEB3 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Puf60Q3UEB3 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Puf60Q3UEB3 Gm8584-201ENSMUST00000171982 758 ntBASIC19.2■□□□□ 0.66
Puf60Q3UEB3 Gm27731-201ENSMUST00000185192 107 ntBASIC19.2■□□□□ 0.66
Puf60Q3UEB3 Gm42442-201ENSMUST00000197951 1133 ntBASIC19.2■□□□□ 0.66
Puf60Q3UEB3 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC19.2■□□□□ 0.66
Puf60Q3UEB3 Gm8598-201ENSMUST00000221184 836 ntBASIC19.2■□□□□ 0.66
Puf60Q3UEB3 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Puf60Q3UEB3 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Puf60Q3UEB3 Ankra2-208ENSMUST00000226100 1476 ntBASIC19.2■□□□□ 0.66
Puf60Q3UEB3 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Puf60Q3UEB3 Gm13050-201ENSMUST00000122149 1345 ntBASIC19.2■□□□□ 0.66
Puf60Q3UEB3 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Puf60Q3UEB3 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Puf60Q3UEB3 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Puf60Q3UEB3 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Puf60Q3UEB3 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Puf60Q3UEB3 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Puf60Q3UEB3 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Puf60Q3UEB3 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Puf60Q3UEB3 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Puf60Q3UEB3 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Puf60Q3UEB3 Gm13392-201ENSMUST00000117708 150 ntBASIC19.19■□□□□ 0.66
Puf60Q3UEB3 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Puf60Q3UEB3 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC19.19■□□□□ 0.66
Puf60Q3UEB3 Snora78-201ENSMUST00000158630 128 ntBASIC19.19■□□□□ 0.66
Puf60Q3UEB3 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC19.19■□□□□ 0.66
Puf60Q3UEB3 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Puf60Q3UEB3 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Puf60Q3UEB3 Gm29649-201ENSMUST00000185649 419 ntBASIC19.19■□□□□ 0.66
Puf60Q3UEB3 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC19.19■□□□□ 0.66
Puf60Q3UEB3 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Puf60Q3UEB3 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Puf60Q3UEB3 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Puf60Q3UEB3 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Puf60Q3UEB3 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Puf60Q3UEB3 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Puf60Q3UEB3 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Puf60Q3UEB3 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Puf60Q3UEB3 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Puf60Q3UEB3 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Puf60Q3UEB3 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Puf60Q3UEB3 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Puf60Q3UEB3 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Puf60Q3UEB3 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Puf60Q3UEB3 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Puf60Q3UEB3 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC19.18■□□□□ 0.66
Puf60Q3UEB3 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC19.18■□□□□ 0.66
Puf60Q3UEB3 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Puf60Q3UEB3 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Puf60Q3UEB3 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC19.18■□□□□ 0.66
Puf60Q3UEB3 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC19.18■□□□□ 0.66
Puf60Q3UEB3 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
Puf60Q3UEB3 Gm37424-201ENSMUST00000191727 561 ntBASIC19.18■□□□□ 0.66
Puf60Q3UEB3 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Puf60Q3UEB3 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Puf60Q3UEB3 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Puf60Q3UEB3 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC19.18■□□□□ 0.66
Puf60Q3UEB3 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Puf60Q3UEB3 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Puf60Q3UEB3 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Puf60Q3UEB3 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Puf60Q3UEB3 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Puf60Q3UEB3 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Puf60Q3UEB3 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC19.17■□□□□ 0.66
Puf60Q3UEB3 Gm8062-201ENSMUST00000139696 444 ntBASIC19.17■□□□□ 0.66
Puf60Q3UEB3 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC19.17■□□□□ 0.66
Puf60Q3UEB3 Mir6420-201ENSMUST00000185032 102 ntBASIC19.17■□□□□ 0.66
Puf60Q3UEB3 Gm45841-201ENSMUST00000207700 164 ntBASIC19.17■□□□□ 0.66
Puf60Q3UEB3 Gm18473-201ENSMUST00000220543 868 ntBASIC19.17■□□□□ 0.66
Puf60Q3UEB3 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Puf60Q3UEB3 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Puf60Q3UEB3 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Puf60Q3UEB3 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC19.17■□□□□ 0.66
Puf60Q3UEB3 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Puf60Q3UEB3 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC19.17■□□□□ 0.66
Puf60Q3UEB3 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Puf60Q3UEB3 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Puf60Q3UEB3 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Puf60Q3UEB3 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms