Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.28□□□□□ -0.28
Brf2Q3UAW9 Gm2756-201ENSMUST00000195851 400 ntBASIC13.28□□□□□ -0.28
Brf2Q3UAW9 Gm44608-201ENSMUST00000206827 855 ntBASIC13.28□□□□□ -0.28
Brf2Q3UAW9 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Brf2Q3UAW9 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Brf2Q3UAW9 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Brf2Q3UAW9 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Brf2Q3UAW9 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Brf2Q3UAW9 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Brf2Q3UAW9 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Brf2Q3UAW9 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Brf2Q3UAW9 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Brf2Q3UAW9 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Brf2Q3UAW9 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Brf2Q3UAW9 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Brf2Q3UAW9 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Brf2Q3UAW9 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Brf2Q3UAW9 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Brf2Q3UAW9 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Brf2Q3UAW9 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Brf2Q3UAW9 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.27□□□□□ -0.28
Brf2Q3UAW9 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Brf2Q3UAW9 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Brf2Q3UAW9 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Brf2Q3UAW9 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.27□□□□□ -0.29
Brf2Q3UAW9 AA543401-201ENSMUST00000164248 1269 ntBASIC13.27□□□□□ -0.29
Brf2Q3UAW9 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.27□□□□□ -0.29
Brf2Q3UAW9 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.27□□□□□ -0.29
Brf2Q3UAW9 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.27□□□□□ -0.29
Brf2Q3UAW9 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Brf2Q3UAW9 Gm43474-201ENSMUST00000196415 774 ntBASIC13.27□□□□□ -0.29
Brf2Q3UAW9 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Brf2Q3UAW9 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Brf2Q3UAW9 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Brf2Q3UAW9 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Brf2Q3UAW9 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.29
Brf2Q3UAW9 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Brf2Q3UAW9 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Brf2Q3UAW9 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Brf2Q3UAW9 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Brf2Q3UAW9 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Brf2Q3UAW9 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
Brf2Q3UAW9 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Brf2Q3UAW9 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Brf2Q3UAW9 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
Brf2Q3UAW9 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Brf2Q3UAW9 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Brf2Q3UAW9 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Brf2Q3UAW9 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Brf2Q3UAW9 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.27□□□□□ -0.29
Brf2Q3UAW9 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Brf2Q3UAW9 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Brf2Q3UAW9 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Brf2Q3UAW9 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Brf2Q3UAW9 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Brf2Q3UAW9 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Brf2Q3UAW9 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Brf2Q3UAW9 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Brf2Q3UAW9 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Brf2Q3UAW9 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.26□□□□□ -0.29
Brf2Q3UAW9 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Brf2Q3UAW9 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Brf2Q3UAW9 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Brf2Q3UAW9 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Brf2Q3UAW9 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.26□□□□□ -0.29
Brf2Q3UAW9 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Brf2Q3UAW9 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Brf2Q3UAW9 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.26□□□□□ -0.29
Brf2Q3UAW9 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Brf2Q3UAW9 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.26□□□□□ -0.29
Brf2Q3UAW9 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Brf2Q3UAW9 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.26□□□□□ -0.29
Brf2Q3UAW9 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Brf2Q3UAW9 Gm24158-201ENSMUST00000175263 71 ntBASIC13.26□□□□□ -0.29
Brf2Q3UAW9 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Brf2Q3UAW9 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Brf2Q3UAW9 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Brf2Q3UAW9 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Brf2Q3UAW9 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Brf2Q3UAW9 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Brf2Q3UAW9 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.26□□□□□ -0.29
Brf2Q3UAW9 Gm45453-201ENSMUST00000211758 853 ntBASIC13.26□□□□□ -0.29
Brf2Q3UAW9 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.26□□□□□ -0.29
Brf2Q3UAW9 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.26□□□□□ -0.29
Brf2Q3UAW9 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Brf2Q3UAW9 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Brf2Q3UAW9 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Brf2Q3UAW9 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Brf2Q3UAW9 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Brf2Q3UAW9 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Brf2Q3UAW9 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Brf2Q3UAW9 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Brf2Q3UAW9 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Brf2Q3UAW9 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Brf2Q3UAW9 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Brf2Q3UAW9 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Brf2Q3UAW9 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Brf2Q3UAW9 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.25□□□□□ -0.29
Brf2Q3UAW9 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms