Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q3U1D9 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q3U1D9 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q3U1D9 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q3U1D9 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q3U1D9 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Q3U1D9 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q3U1D9 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Q3U1D9 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q3U1D9 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Q3U1D9 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Q3U1D9 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Q3U1D9 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Q3U1D9 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Q3U1D9 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Q3U1D9 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Q3U1D9 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Q3U1D9 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.21□□□□□ -0.45
Q3U1D9 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Q3U1D9 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Q3U1D9 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Q3U1D9 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Q3U1D9 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Q3U1D9 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Q3U1D9 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.21□□□□□ -0.45
Q3U1D9 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Q3U1D9 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.21□□□□□ -0.45
Q3U1D9 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Q3U1D9 Mir6392-201ENSMUST00000184924 108 ntBASIC12.21□□□□□ -0.45
Q3U1D9 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.21□□□□□ -0.45
Q3U1D9 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Q3U1D9 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Q3U1D9 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.21□□□□□ -0.45
Q3U1D9 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Q3U1D9 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Q3U1D9 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Q3U1D9 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Q3U1D9 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Q3U1D9 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Q3U1D9 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
Q3U1D9 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
Q3U1D9 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Q3U1D9 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Q3U1D9 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Q3U1D9 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Q3U1D9 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Q3U1D9 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Q3U1D9 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Q3U1D9 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Q3U1D9 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Q3U1D9 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Q3U1D9 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Q3U1D9 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Q3U1D9 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Q3U1D9 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Q3U1D9 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Q3U1D9 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Q3U1D9 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Q3U1D9 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Q3U1D9 Gm11478-201ENSMUST00000117851 599 ntBASIC12.2□□□□□ -0.46
Q3U1D9 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.2□□□□□ -0.46
Q3U1D9 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.2□□□□□ -0.46
Q3U1D9 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Q3U1D9 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.2□□□□□ -0.46
Q3U1D9 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Q3U1D9 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Q3U1D9 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Q3U1D9 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Q3U1D9 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Q3U1D9 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Q3U1D9 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Q3U1D9 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Q3U1D9 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Q3U1D9 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Q3U1D9 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Q3U1D9 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Q3U1D9 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Q3U1D9 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Q3U1D9 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Q3U1D9 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.19□□□□□ -0.46
Q3U1D9 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Q3U1D9 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Q3U1D9 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Q3U1D9 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.19□□□□□ -0.46
Q3U1D9 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.19□□□□□ -0.46
Q3U1D9 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Q3U1D9 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.19□□□□□ -0.46
Q3U1D9 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Q3U1D9 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Q3U1D9 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.19□□□□□ -0.46
Q3U1D9 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Q3U1D9 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Q3U1D9 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.19□□□□□ -0.46
Q3U1D9 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Q3U1D9 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Q3U1D9 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Q3U1D9 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Q3U1D9 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Q3U1D9 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Q3U1D9 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms