Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chrna5Q2MKA5 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Chrna5Q2MKA5 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chrna5Q2MKA5 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chrna5Q2MKA5 Gm45630-201ENSMUST00000210243 1911 ntBASIC16.64■□□□□ 0.25
Chrna5Q2MKA5 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chrna5Q2MKA5 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chrna5Q2MKA5 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chrna5Q2MKA5 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC16.64■□□□□ 0.25
Chrna5Q2MKA5 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Chrna5Q2MKA5 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC16.63■□□□□ 0.25
Chrna5Q2MKA5 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna5Q2MKA5 Gm13859-201ENSMUST00000119936 1423 ntBASIC16.63■□□□□ 0.25
Chrna5Q2MKA5 Gm10339-203ENSMUST00000225409 1671 ntBASIC16.63■□□□□ 0.25
Chrna5Q2MKA5 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna5Q2MKA5 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Chrna5Q2MKA5 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna5Q2MKA5 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna5Q2MKA5 Gm8801-201ENSMUST00000173255 1064 ntBASIC16.63■□□□□ 0.25
Chrna5Q2MKA5 Gm27682-201ENSMUST00000183930 110 ntBASIC16.63■□□□□ 0.25
Chrna5Q2MKA5 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC16.63■□□□□ 0.25
Chrna5Q2MKA5 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna5Q2MKA5 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna5Q2MKA5 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Chrna5Q2MKA5 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Chrna5Q2MKA5 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Chrna5Q2MKA5 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna5Q2MKA5 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna5Q2MKA5 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Chrna5Q2MKA5 AC168058.1-201ENSMUST00000219521 2282 ntBASIC16.63■□□□□ 0.25
Chrna5Q2MKA5 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna5Q2MKA5 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna5Q2MKA5 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna5Q2MKA5 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna5Q2MKA5 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna5Q2MKA5 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna5Q2MKA5 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna5Q2MKA5 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna5Q2MKA5 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chrna5Q2MKA5 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chrna5Q2MKA5 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
Chrna5Q2MKA5 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chrna5Q2MKA5 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chrna5Q2MKA5 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chrna5Q2MKA5 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chrna5Q2MKA5 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chrna5Q2MKA5 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.62■□□□□ 0.25
Chrna5Q2MKA5 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chrna5Q2MKA5 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chrna5Q2MKA5 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chrna5Q2MKA5 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chrna5Q2MKA5 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC16.62■□□□□ 0.25
Chrna5Q2MKA5 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC16.62■□□□□ 0.25
Chrna5Q2MKA5 Gm1335-201ENSMUST00000121653 386 ntBASIC16.62■□□□□ 0.25
Chrna5Q2MKA5 Gm10156-201ENSMUST00000122364 462 ntBASIC16.62■□□□□ 0.25
Chrna5Q2MKA5 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Chrna5Q2MKA5 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Chrna5Q2MKA5 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC16.62■□□□□ 0.25
Chrna5Q2MKA5 Mir3102-201ENSMUST00000175555 104 ntBASIC16.62■□□□□ 0.25
Chrna5Q2MKA5 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC16.62■□□□□ 0.25
Chrna5Q2MKA5 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC16.62■□□□□ 0.25
Chrna5Q2MKA5 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC16.62■□□□□ 0.25
Chrna5Q2MKA5 Gm43822-201ENSMUST00000200285 476 ntBASIC16.62■□□□□ 0.25
Chrna5Q2MKA5 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC16.62■□□□□ 0.25
Chrna5Q2MKA5 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chrna5Q2MKA5 CT030704.2-201ENSMUST00000228887 494 ntBASIC16.62■□□□□ 0.25
Chrna5Q2MKA5 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chrna5Q2MKA5 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chrna5Q2MKA5 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chrna5Q2MKA5 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Chrna5Q2MKA5 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chrna5Q2MKA5 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Chrna5Q2MKA5 Gm12846-201ENSMUST00000120431 1373 ntBASIC16.62■□□□□ 0.25
Chrna5Q2MKA5 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chrna5Q2MKA5 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chrna5Q2MKA5 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC16.62■□□□□ 0.25
Chrna5Q2MKA5 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chrna5Q2MKA5 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chrna5Q2MKA5 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC16.62■□□□□ 0.25
Chrna5Q2MKA5 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chrna5Q2MKA5 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna5Q2MKA5 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna5Q2MKA5 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna5Q2MKA5 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna5Q2MKA5 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna5Q2MKA5 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna5Q2MKA5 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna5Q2MKA5 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC16.61■□□□□ 0.25
Chrna5Q2MKA5 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna5Q2MKA5 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna5Q2MKA5 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna5Q2MKA5 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna5Q2MKA5 Gm13350-201ENSMUST00000120519 479 ntBASIC16.61■□□□□ 0.25
Chrna5Q2MKA5 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna5Q2MKA5 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna5Q2MKA5 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna5Q2MKA5 Gm27501-201ENSMUST00000183599 107 ntBASIC16.61■□□□□ 0.25
Chrna5Q2MKA5 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC16.61■□□□□ 0.25
Chrna5Q2MKA5 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna5Q2MKA5 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms