Protein–RNA interactions for Protein: Q0P523

Cib3, Calcium and integrin-binding family member 3, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cib3Q0P523 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cib3Q0P523 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cib3Q0P523 Otx2os1-204ENSMUST00000227221 751 ntBASIC10.62□□□□□ -0.71
Cib3Q0P523 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cib3Q0P523 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cib3Q0P523 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cib3Q0P523 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cib3Q0P523 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Cib3Q0P523 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cib3Q0P523 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cib3Q0P523 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cib3Q0P523 AC126250.1-201ENSMUST00000228343 1768 ntBASIC10.62□□□□□ -0.71
Cib3Q0P523 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC10.62□□□□□ -0.71
Cib3Q0P523 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cib3Q0P523 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cib3Q0P523 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cib3Q0P523 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cib3Q0P523 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cib3Q0P523 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Cib3Q0P523 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cib3Q0P523 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.61□□□□□ -0.71
Cib3Q0P523 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cib3Q0P523 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cib3Q0P523 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC10.61□□□□□ -0.71
Cib3Q0P523 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Cib3Q0P523 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Cib3Q0P523 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cib3Q0P523 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Cib3Q0P523 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cib3Q0P523 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cib3Q0P523 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cib3Q0P523 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cib3Q0P523 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cib3Q0P523 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cib3Q0P523 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cib3Q0P523 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Cib3Q0P523 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cib3Q0P523 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cib3Q0P523 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cib3Q0P523 Gm21009-201ENSMUST00000197169 1669 ntBASIC10.61□□□□□ -0.71
Cib3Q0P523 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC10.61□□□□□ -0.71
Cib3Q0P523 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cib3Q0P523 Mir1199-201ENSMUST00000117015 119 ntBASIC10.61□□□□□ -0.71
Cib3Q0P523 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cib3Q0P523 Gm18284-201ENSMUST00000172604 624 ntBASIC10.61□□□□□ -0.71
Cib3Q0P523 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cib3Q0P523 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC10.61□□□□□ -0.71
Cib3Q0P523 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cib3Q0P523 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC10.61□□□□□ -0.71
Cib3Q0P523 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cib3Q0P523 Mxra8os-201ENSMUST00000097740 687 ntBASIC10.61□□□□□ -0.71
Cib3Q0P523 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cib3Q0P523 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cib3Q0P523 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cib3Q0P523 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cib3Q0P523 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cib3Q0P523 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cib3Q0P523 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cib3Q0P523 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cib3Q0P523 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Cib3Q0P523 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC10.61□□□□□ -0.71
Cib3Q0P523 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cib3Q0P523 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC10.61□□□□□ -0.71
Cib3Q0P523 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cib3Q0P523 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cib3Q0P523 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cib3Q0P523 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cib3Q0P523 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cib3Q0P523 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cib3Q0P523 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC10.61□□□□□ -0.71
Cib3Q0P523 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cib3Q0P523 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Cib3Q0P523 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cib3Q0P523 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cib3Q0P523 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cib3Q0P523 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cib3Q0P523 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cib3Q0P523 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cib3Q0P523 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Cib3Q0P523 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Cib3Q0P523 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cib3Q0P523 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cib3Q0P523 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Cib3Q0P523 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cib3Q0P523 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cib3Q0P523 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cib3Q0P523 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cib3Q0P523 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC10.6□□□□□ -0.71
Cib3Q0P523 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cib3Q0P523 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC10.6□□□□□ -0.71
Cib3Q0P523 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cib3Q0P523 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.6□□□□□ -0.71
Cib3Q0P523 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cib3Q0P523 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cib3Q0P523 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC10.6□□□□□ -0.71
Cib3Q0P523 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cib3Q0P523 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Cib3Q0P523 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cib3Q0P523 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cib3Q0P523 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms