Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gm8885-201ENSMUST00000189382 598 ntBASIC12.46□□□□□ -0.41
Chd8Q09XV5 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.46□□□□□ -0.41
Chd8Q09XV5 AC135469.1-201ENSMUST00000225984 772 ntBASIC12.46□□□□□ -0.41
Chd8Q09XV5 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chd8Q09XV5 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chd8Q09XV5 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chd8Q09XV5 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chd8Q09XV5 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.46□□□□□ -0.41
Chd8Q09XV5 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chd8Q09XV5 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chd8Q09XV5 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chd8Q09XV5 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.46□□□□□ -0.41
Chd8Q09XV5 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chd8Q09XV5 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
Chd8Q09XV5 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.46□□□□□ -0.41
Chd8Q09XV5 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Chd8Q09XV5 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chd8Q09XV5 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chd8Q09XV5 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chd8Q09XV5 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chd8Q09XV5 Gm13464-201ENSMUST00000119418 935 ntBASIC12.46□□□□□ -0.42
Chd8Q09XV5 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chd8Q09XV5 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Chd8Q09XV5 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.46□□□□□ -0.42
Chd8Q09XV5 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC12.46□□□□□ -0.42
Chd8Q09XV5 Gm8365-201ENSMUST00000197334 648 ntBASIC12.46□□□□□ -0.42
Chd8Q09XV5 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.46□□□□□ -0.42
Chd8Q09XV5 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.46□□□□□ -0.42
Chd8Q09XV5 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Chd8Q09XV5 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chd8Q09XV5 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chd8Q09XV5 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chd8Q09XV5 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Chd8Q09XV5 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chd8Q09XV5 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Chd8Q09XV5 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.45□□□□□ -0.42
Chd8Q09XV5 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Chd8Q09XV5 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.45□□□□□ -0.42
Chd8Q09XV5 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC12.45□□□□□ -0.42
Chd8Q09XV5 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Chd8Q09XV5 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chd8Q09XV5 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Chd8Q09XV5 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Chd8Q09XV5 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chd8Q09XV5 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chd8Q09XV5 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chd8Q09XV5 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chd8Q09XV5 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chd8Q09XV5 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chd8Q09XV5 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chd8Q09XV5 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chd8Q09XV5 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Chd8Q09XV5 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chd8Q09XV5 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Chd8Q09XV5 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC12.45□□□□□ -0.42
Chd8Q09XV5 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Chd8Q09XV5 Gm4862-201ENSMUST00000170405 438 ntBASIC12.45□□□□□ -0.42
Chd8Q09XV5 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.45□□□□□ -0.42
Chd8Q09XV5 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.45□□□□□ -0.42
Chd8Q09XV5 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chd8Q09XV5 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Chd8Q09XV5 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chd8Q09XV5 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chd8Q09XV5 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.45□□□□□ -0.42
Chd8Q09XV5 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chd8Q09XV5 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chd8Q09XV5 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd8Q09XV5 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chd8Q09XV5 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd8Q09XV5 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chd8Q09XV5 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Chd8Q09XV5 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd8Q09XV5 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd8Q09XV5 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Chd8Q09XV5 Gm9954-202ENSMUST00000198686 4725 ntBASIC12.44□□□□□ -0.42
Chd8Q09XV5 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.44□□□□□ -0.42
Chd8Q09XV5 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chd8Q09XV5 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Chd8Q09XV5 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC12.44□□□□□ -0.42
Chd8Q09XV5 Gm45856-201ENSMUST00000212752 416 ntBASIC12.44□□□□□ -0.42
Chd8Q09XV5 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chd8Q09XV5 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd8Q09XV5 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd8Q09XV5 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chd8Q09XV5 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd8Q09XV5 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd8Q09XV5 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Chd8Q09XV5 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.44□□□□□ -0.42
Chd8Q09XV5 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd8Q09XV5 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd8Q09XV5 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chd8Q09XV5 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd8Q09XV5 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd8Q09XV5 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd8Q09XV5 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd8Q09XV5 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd8Q09XV5 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd8Q09XV5 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Chd8Q09XV5 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.44□□□□□ -0.42
Chd8Q09XV5 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms