Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ebf1Q07802 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ebf1Q07802 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ebf1Q07802 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.27□□□□□ -0.12
Ebf1Q07802 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ebf1Q07802 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ebf1Q07802 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ebf1Q07802 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ebf1Q07802 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Ebf1Q07802 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ebf1Q07802 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ebf1Q07802 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.27□□□□□ -0.13
Ebf1Q07802 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.27□□□□□ -0.13
Ebf1Q07802 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.27□□□□□ -0.13
Ebf1Q07802 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.27□□□□□ -0.13
Ebf1Q07802 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Ebf1Q07802 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ebf1Q07802 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ebf1Q07802 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ebf1Q07802 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ebf1Q07802 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ebf1Q07802 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.27□□□□□ -0.13
Ebf1Q07802 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ebf1Q07802 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ebf1Q07802 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Ebf1Q07802 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ebf1Q07802 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ebf1Q07802 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ebf1Q07802 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.27□□□□□ -0.13
Ebf1Q07802 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ebf1Q07802 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ebf1Q07802 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ebf1Q07802 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Ebf1Q07802 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ebf1Q07802 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ebf1Q07802 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ebf1Q07802 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ebf1Q07802 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ebf1Q07802 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf1Q07802 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
Ebf1Q07802 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf1Q07802 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf1Q07802 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Ebf1Q07802 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf1Q07802 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf1Q07802 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf1Q07802 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf1Q07802 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf1Q07802 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf1Q07802 Gm15393-201ENSMUST00000120499 219 ntBASIC14.26□□□□□ -0.13
Ebf1Q07802 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ebf1Q07802 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.26□□□□□ -0.13
Ebf1Q07802 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.26□□□□□ -0.13
Ebf1Q07802 Gm6916-202ENSMUST00000205523 195 ntBASIC14.26□□□□□ -0.13
Ebf1Q07802 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf1Q07802 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ebf1Q07802 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC14.26□□□□□ -0.13
Ebf1Q07802 Gm9899-201ENSMUST00000065519 555 ntBASIC14.26□□□□□ -0.13
Ebf1Q07802 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf1Q07802 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ebf1Q07802 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ebf1Q07802 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf1Q07802 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf1Q07802 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
Ebf1Q07802 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf1Q07802 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf1Q07802 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf1Q07802 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf1Q07802 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf1Q07802 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ebf1Q07802 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf1Q07802 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ebf1Q07802 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf1Q07802 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf1Q07802 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.25□□□□□ -0.13
Ebf1Q07802 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf1Q07802 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf1Q07802 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf1Q07802 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ebf1Q07802 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf1Q07802 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf1Q07802 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf1Q07802 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf1Q07802 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.25□□□□□ -0.13
Ebf1Q07802 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Ebf1Q07802 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.25□□□□□ -0.13
Ebf1Q07802 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.25□□□□□ -0.13
Ebf1Q07802 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC14.25□□□□□ -0.13
Ebf1Q07802 Gm5354-201ENSMUST00000182417 973 ntBASIC14.25□□□□□ -0.13
Ebf1Q07802 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.25□□□□□ -0.13
Ebf1Q07802 Gm33320-201ENSMUST00000192232 530 ntBASIC14.25□□□□□ -0.13
Ebf1Q07802 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ebf1Q07802 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf1Q07802 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf1Q07802 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf1Q07802 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf1Q07802 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf1Q07802 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf1Q07802 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ebf1Q07802 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms