Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a2Q02788 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a2Q02788 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a2Q02788 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a2Q02788 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.05□□□□□ -0.16
Col6a2Q02788 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a2Q02788 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a2Q02788 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a2Q02788 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Col6a2Q02788 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a2Q02788 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a2Q02788 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a2Q02788 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a2Q02788 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.04□□□□□ -0.16
Col6a2Q02788 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a2Q02788 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a2Q02788 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a2Q02788 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a2Q02788 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a2Q02788 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a2Q02788 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Col6a2Q02788 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a2Q02788 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.04□□□□□ -0.16
Col6a2Q02788 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.04□□□□□ -0.16
Col6a2Q02788 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a2Q02788 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a2Q02788 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a2Q02788 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a2Q02788 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a2Q02788 Gm21854-201ENSMUST00000179901 471 ntBASIC14.04□□□□□ -0.16
Col6a2Q02788 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Col6a2Q02788 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.04□□□□□ -0.16
Col6a2Q02788 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.04□□□□□ -0.16
Col6a2Q02788 Gm37714-201ENSMUST00000194742 342 ntBASIC14.04□□□□□ -0.16
Col6a2Q02788 Gm44608-201ENSMUST00000206827 855 ntBASIC14.04□□□□□ -0.16
Col6a2Q02788 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.04□□□□□ -0.16
Col6a2Q02788 Gm18027-201ENSMUST00000218947 619 ntBASIC14.04□□□□□ -0.16
Col6a2Q02788 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a2Q02788 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.04□□□□□ -0.16
Col6a2Q02788 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a2Q02788 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.04□□□□□ -0.16
Col6a2Q02788 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a2Q02788 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a2Q02788 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.04□□□□□ -0.16
Col6a2Q02788 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a2Q02788 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a2Q02788 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a2Q02788 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Col6a2Q02788 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a2Q02788 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a2Q02788 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a2Q02788 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a2Q02788 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Col6a2Q02788 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a2Q02788 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a2Q02788 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a2Q02788 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a2Q02788 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.03□□□□□ -0.16
Col6a2Q02788 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a2Q02788 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a2Q02788 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a2Q02788 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a2Q02788 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Col6a2Q02788 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a2Q02788 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.03□□□□□ -0.16
Col6a2Q02788 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Col6a2Q02788 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.03□□□□□ -0.16
Col6a2Q02788 Gm11424-201ENSMUST00000121929 829 ntBASIC14.03□□□□□ -0.16
Col6a2Q02788 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.03□□□□□ -0.16
Col6a2Q02788 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Col6a2Q02788 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.03□□□□□ -0.16
Col6a2Q02788 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Col6a2Q02788 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a2Q02788 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a2Q02788 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Col6a2Q02788 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a2Q02788 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.03□□□□□ -0.16
Col6a2Q02788 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a2Q02788 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a2Q02788 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a2Q02788 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a2Q02788 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a2Q02788 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Col6a2Q02788 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a2Q02788 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a2Q02788 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a2Q02788 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a2Q02788 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Col6a2Q02788 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Col6a2Q02788 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a2Q02788 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a2Q02788 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col6a2Q02788 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col6a2Q02788 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col6a2Q02788 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col6a2Q02788 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col6a2Q02788 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.02□□□□□ -0.16
Col6a2Q02788 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.02□□□□□ -0.16
Col6a2Q02788 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.02□□□□□ -0.16
Col6a2Q02788 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms