Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx3-2P97503 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Nkx3-2P97503 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx3-2P97503 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx3-2P97503 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx3-2P97503 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.32□□□□□ -0.28
Nkx3-2P97503 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx3-2P97503 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Nkx3-2P97503 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.32□□□□□ -0.28
Nkx3-2P97503 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.32□□□□□ -0.28
Nkx3-2P97503 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx3-2P97503 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx3-2P97503 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx3-2P97503 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Nkx3-2P97503 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx3-2P97503 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx3-2P97503 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx3-2P97503 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx3-2P97503 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Nkx3-2P97503 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx3-2P97503 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx3-2P97503 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Nkx3-2P97503 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.32□□□□□ -0.28
Nkx3-2P97503 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Nkx3-2P97503 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx3-2P97503 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx3-2P97503 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx3-2P97503 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx3-2P97503 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx3-2P97503 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx3-2P97503 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Nkx3-2P97503 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx3-2P97503 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx3-2P97503 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Nkx3-2P97503 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx3-2P97503 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx3-2P97503 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Nkx3-2P97503 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx3-2P97503 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx3-2P97503 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx3-2P97503 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.31□□□□□ -0.28
Nkx3-2P97503 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx3-2P97503 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.31□□□□□ -0.28
Nkx3-2P97503 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.31□□□□□ -0.28
Nkx3-2P97503 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx3-2P97503 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx3-2P97503 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx3-2P97503 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx3-2P97503 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx3-2P97503 Mir125a-201ENSMUST00000083545 68 ntBASIC13.31□□□□□ -0.28
Nkx3-2P97503 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx3-2P97503 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx3-2P97503 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Nkx3-2P97503 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx3-2P97503 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Nkx3-2P97503 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Nkx3-2P97503 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Nkx3-2P97503 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx3-2P97503 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx3-2P97503 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx3-2P97503 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx3-2P97503 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx3-2P97503 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx3-2P97503 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx3-2P97503 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx3-2P97503 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx3-2P97503 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Nkx3-2P97503 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx3-2P97503 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx3-2P97503 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx3-2P97503 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Nkx3-2P97503 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Nkx3-2P97503 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.3□□□□□ -0.28
Nkx3-2P97503 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx3-2P97503 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx3-2P97503 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Nkx3-2P97503 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx3-2P97503 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx3-2P97503 Gm4875-201ENSMUST00000118257 786 ntBASIC13.3□□□□□ -0.28
Nkx3-2P97503 Gm14042-201ENSMUST00000120139 833 ntBASIC13.3□□□□□ -0.28
Nkx3-2P97503 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.3□□□□□ -0.28
Nkx3-2P97503 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx3-2P97503 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx3-2P97503 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.3□□□□□ -0.28
Nkx3-2P97503 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx3-2P97503 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.3□□□□□ -0.28
Nkx3-2P97503 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
Nkx3-2P97503 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx3-2P97503 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.3□□□□□ -0.28
Nkx3-2P97503 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx3-2P97503 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx3-2P97503 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Nkx3-2P97503 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx3-2P97503 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx3-2P97503 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx3-2P97503 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx3-2P97503 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx3-2P97503 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx3-2P97503 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.3□□□□□ -0.28
Nkx3-2P97503 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms