Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Npas1P97459 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Npas1P97459 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Npas1P97459 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Npas1P97459 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Npas1P97459 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Npas1P97459 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC11.83□□□□□ -0.52
Npas1P97459 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Npas1P97459 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Npas1P97459 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Npas1P97459 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Npas1P97459 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.83□□□□□ -0.52
Npas1P97459 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Npas1P97459 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC11.83□□□□□ -0.52
Npas1P97459 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Npas1P97459 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Npas1P97459 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Npas1P97459 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Npas1P97459 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Npas1P97459 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC11.83□□□□□ -0.52
Npas1P97459 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Npas1P97459 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Npas1P97459 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Npas1P97459 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Npas1P97459 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Npas1P97459 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Npas1P97459 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Npas1P97459 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Npas1P97459 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Npas1P97459 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.83□□□□□ -0.52
Npas1P97459 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11.83□□□□□ -0.52
Npas1P97459 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Npas1P97459 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Npas1P97459 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Npas1P97459 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Npas1P97459 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Npas1P97459 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Npas1P97459 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Npas1P97459 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Npas1P97459 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Npas1P97459 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Npas1P97459 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Npas1P97459 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.82□□□□□ -0.52
Npas1P97459 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Npas1P97459 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Npas1P97459 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Npas1P97459 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Npas1P97459 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.82□□□□□ -0.52
Npas1P97459 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Npas1P97459 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Npas1P97459 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Npas1P97459 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Npas1P97459 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Npas1P97459 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC11.82□□□□□ -0.52
Npas1P97459 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Npas1P97459 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Npas1P97459 Gm13830-205ENSMUST00000201195 1155 ntBASIC11.82□□□□□ -0.52
Npas1P97459 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC11.82□□□□□ -0.52
Npas1P97459 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Npas1P97459 AC159301.1-201ENSMUST00000225130 1182 ntBASIC11.82□□□□□ -0.52
Npas1P97459 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Npas1P97459 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Npas1P97459 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Npas1P97459 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Npas1P97459 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Npas1P97459 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Npas1P97459 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Npas1P97459 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC11.82□□□□□ -0.52
Npas1P97459 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Npas1P97459 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Npas1P97459 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Npas1P97459 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Npas1P97459 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Npas1P97459 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Npas1P97459 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Npas1P97459 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Npas1P97459 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Npas1P97459 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Npas1P97459 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.81□□□□□ -0.52
Npas1P97459 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Npas1P97459 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Npas1P97459 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Npas1P97459 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Npas1P97459 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Npas1P97459 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.81□□□□□ -0.52
Npas1P97459 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Npas1P97459 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Npas1P97459 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Npas1P97459 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Npas1P97459 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Npas1P97459 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Npas1P97459 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Npas1P97459 Trav13-3-201ENSMUST00000117226 336 ntBASIC11.81□□□□□ -0.52
Npas1P97459 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Npas1P97459 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Npas1P97459 Gm37153-201ENSMUST00000193637 231 ntBASIC11.81□□□□□ -0.52
Npas1P97459 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Npas1P97459 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Npas1P97459 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC11.81□□□□□ -0.52
Npas1P97459 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms