Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PrkdcP97313 Gm9347-201ENSMUST00000211473 1607 ntBASIC9.36□□□□□ -0.91
PrkdcP97313 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
PrkdcP97313 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PrkdcP97313 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
PrkdcP97313 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC9.36□□□□□ -0.91
PrkdcP97313 Gm5778-201ENSMUST00000171003 1072 ntBASIC9.36□□□□□ -0.91
PrkdcP97313 Gm19459-201ENSMUST00000176240 835 ntBASIC9.36□□□□□ -0.91
PrkdcP97313 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC9.36□□□□□ -0.91
PrkdcP97313 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC9.36□□□□□ -0.91
PrkdcP97313 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PrkdcP97313 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC9.36□□□□□ -0.91
PrkdcP97313 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PrkdcP97313 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PrkdcP97313 Gm9755-201ENSMUST00000032981 1356 ntBASIC9.36□□□□□ -0.91
PrkdcP97313 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
PrkdcP97313 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PrkdcP97313 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
PrkdcP97313 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC9.36□□□□□ -0.91
PrkdcP97313 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC9.36□□□□□ -0.91
PrkdcP97313 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC9.36□□□□□ -0.91
PrkdcP97313 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC9.36□□□□□ -0.91
PrkdcP97313 Gm32025-201ENSMUST00000217960 307 ntBASIC9.36□□□□□ -0.91
PrkdcP97313 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
PrkdcP97313 Gm5781-201ENSMUST00000219792 443 ntBASIC9.36□□□□□ -0.91
PrkdcP97313 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PrkdcP97313 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PrkdcP97313 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PrkdcP97313 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
PrkdcP97313 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PrkdcP97313 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
PrkdcP97313 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
PrkdcP97313 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
PrkdcP97313 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
PrkdcP97313 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
PrkdcP97313 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
PrkdcP97313 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC9.35□□□□□ -0.91
PrkdcP97313 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC9.35□□□□□ -0.91
PrkdcP97313 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
PrkdcP97313 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC9.35□□□□□ -0.91
PrkdcP97313 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
PrkdcP97313 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
PrkdcP97313 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
PrkdcP97313 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
PrkdcP97313 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
PrkdcP97313 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
PrkdcP97313 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC9.35□□□□□ -0.91
PrkdcP97313 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC9.35□□□□□ -0.91
PrkdcP97313 Gm8738-201ENSMUST00000172606 329 ntBASIC9.35□□□□□ -0.91
PrkdcP97313 Gm26956-201ENSMUST00000182176 986 ntBASIC9.35□□□□□ -0.91
PrkdcP97313 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC9.35□□□□□ -0.91
PrkdcP97313 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
PrkdcP97313 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
PrkdcP97313 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
PrkdcP97313 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
PrkdcP97313 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
PrkdcP97313 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
PrkdcP97313 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
PrkdcP97313 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
PrkdcP97313 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
PrkdcP97313 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC9.35□□□□□ -0.91
PrkdcP97313 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
PrkdcP97313 Gm19353-201ENSMUST00000184561 445 ntBASIC9.35□□□□□ -0.91
PrkdcP97313 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC9.35□□□□□ -0.91
PrkdcP97313 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
PrkdcP97313 Spcs1-203ENSMUST00000226374 592 ntBASIC9.35□□□□□ -0.91
PrkdcP97313 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
PrkdcP97313 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
PrkdcP97313 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
PrkdcP97313 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
PrkdcP97313 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
PrkdcP97313 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
PrkdcP97313 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC9.34□□□□□ -0.91
PrkdcP97313 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
PrkdcP97313 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
PrkdcP97313 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
PrkdcP97313 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
PrkdcP97313 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC9.34□□□□□ -0.91
PrkdcP97313 Gm12816-201ENSMUST00000118069 1212 ntBASIC9.34□□□□□ -0.91
PrkdcP97313 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC9.34□□□□□ -0.91
PrkdcP97313 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
PrkdcP97313 Gm5879-201ENSMUST00000089501 1209 ntBASIC9.34□□□□□ -0.91
PrkdcP97313 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
PrkdcP97313 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
PrkdcP97313 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
PrkdcP97313 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
PrkdcP97313 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
PrkdcP97313 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
PrkdcP97313 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
PrkdcP97313 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
PrkdcP97313 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
PrkdcP97313 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
PrkdcP97313 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
PrkdcP97313 Gm11531-201ENSMUST00000117614 555 ntBASIC9.34□□□□□ -0.91
PrkdcP97313 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC9.34□□□□□ -0.91
PrkdcP97313 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC9.34□□□□□ -0.91
PrkdcP97313 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC9.34□□□□□ -0.91
PrkdcP97313 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC9.34□□□□□ -0.91
PrkdcP97313 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
PrkdcP97313 Gm7848-201ENSMUST00000210739 718 ntBASIC9.34□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms