Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CiitaP79621 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC15.22■□□□□ 0.03
CiitaP79621 Gm12490-201ENSMUST00000120255 560 ntBASIC15.22■□□□□ 0.03
CiitaP79621 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC15.22■□□□□ 0.03
CiitaP79621 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CiitaP79621 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CiitaP79621 Gm9794-201ENSMUST00000202370 423 ntBASIC15.22■□□□□ 0.03
CiitaP79621 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CiitaP79621 AC238811.3-201ENSMUST00000225422 709 ntBASIC15.22■□□□□ 0.03
CiitaP79621 AC149294.4-201ENSMUST00000227870 882 ntBASIC15.22■□□□□ 0.03
CiitaP79621 CT030704.2-201ENSMUST00000228887 494 ntBASIC15.22■□□□□ 0.03
CiitaP79621 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CiitaP79621 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CiitaP79621 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC15.22■□□□□ 0.03
CiitaP79621 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CiitaP79621 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CiitaP79621 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CiitaP79621 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CiitaP79621 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CiitaP79621 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CiitaP79621 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CiitaP79621 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CiitaP79621 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CiitaP79621 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CiitaP79621 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CiitaP79621 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
CiitaP79621 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CiitaP79621 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CiitaP79621 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CiitaP79621 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CiitaP79621 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CiitaP79621 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CiitaP79621 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CiitaP79621 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC15.21■□□□□ 0.03
CiitaP79621 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CiitaP79621 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CiitaP79621 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CiitaP79621 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CiitaP79621 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.21■□□□□ 0.03
CiitaP79621 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CiitaP79621 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CiitaP79621 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CiitaP79621 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CiitaP79621 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CiitaP79621 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CiitaP79621 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC15.21■□□□□ 0.03
CiitaP79621 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC15.21■□□□□ 0.03
CiitaP79621 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CiitaP79621 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC15.21■□□□□ 0.03
CiitaP79621 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC15.21■□□□□ 0.03
CiitaP79621 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CiitaP79621 AC154687.2-201ENSMUST00000223853 640 ntBASIC15.21■□□□□ 0.03
CiitaP79621 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC15.21■□□□□ 0.03
CiitaP79621 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CiitaP79621 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CiitaP79621 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.21■□□□□ 0.03
CiitaP79621 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CiitaP79621 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CiitaP79621 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CiitaP79621 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CiitaP79621 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CiitaP79621 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.21■□□□□ 0.02
CiitaP79621 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CiitaP79621 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CiitaP79621 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CiitaP79621 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CiitaP79621 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CiitaP79621 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.2■□□□□ 0.02
CiitaP79621 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CiitaP79621 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CiitaP79621 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CiitaP79621 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CiitaP79621 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.2■□□□□ 0.02
CiitaP79621 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CiitaP79621 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
CiitaP79621 Gm11424-201ENSMUST00000121929 829 ntBASIC15.2■□□□□ 0.02
CiitaP79621 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CiitaP79621 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CiitaP79621 Gm8584-201ENSMUST00000171982 758 ntBASIC15.2■□□□□ 0.02
CiitaP79621 Gm5745-201ENSMUST00000183748 313 ntBASIC15.2■□□□□ 0.02
CiitaP79621 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CiitaP79621 Gm4971-201ENSMUST00000205991 1108 ntBASIC15.2■□□□□ 0.02
CiitaP79621 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CiitaP79621 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CiitaP79621 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CiitaP79621 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CiitaP79621 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CiitaP79621 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CiitaP79621 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CiitaP79621 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.2■□□□□ 0.02
CiitaP79621 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CiitaP79621 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC15.2■□□□□ 0.02
CiitaP79621 AC154527.2-201ENSMUST00000225256 1466 ntBASIC15.2■□□□□ 0.02
CiitaP79621 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CiitaP79621 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CiitaP79621 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.19■□□□□ 0.02
CiitaP79621 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CiitaP79621 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CiitaP79621 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CiitaP79621 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms