Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb1P70662 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb1P70662 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb1P70662 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb1P70662 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb1P70662 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb1P70662 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb1P70662 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb1P70662 Mir449b-201ENSMUST00000104833 80 ntBASIC14.04□□□□□ -0.16
Ldb1P70662 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb1P70662 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.04□□□□□ -0.16
Ldb1P70662 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb1P70662 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.04□□□□□ -0.16
Ldb1P70662 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ldb1P70662 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb1P70662 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ldb1P70662 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb1P70662 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb1P70662 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb1P70662 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb1P70662 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.04□□□□□ -0.16
Ldb1P70662 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb1P70662 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb1P70662 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb1P70662 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb1P70662 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb1P70662 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb1P70662 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb1P70662 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb1P70662 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb1P70662 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb1P70662 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb1P70662 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb1P70662 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb1P70662 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb1P70662 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ldb1P70662 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb1P70662 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb1P70662 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb1P70662 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb1P70662 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb1P70662 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb1P70662 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb1P70662 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb1P70662 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb1P70662 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
Ldb1P70662 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb1P70662 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb1P70662 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb1P70662 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb1P70662 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ldb1P70662 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Ldb1P70662 Gm14701-201ENSMUST00000117156 348 ntBASIC14.03□□□□□ -0.16
Ldb1P70662 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb1P70662 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb1P70662 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ldb1P70662 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ldb1P70662 Gm10253-201ENSMUST00000194270 940 ntBASIC14.03□□□□□ -0.16
Ldb1P70662 Gm45453-201ENSMUST00000211758 853 ntBASIC14.03□□□□□ -0.16
Ldb1P70662 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.03□□□□□ -0.16
Ldb1P70662 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.03□□□□□ -0.16
Ldb1P70662 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb1P70662 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb1P70662 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb1P70662 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb1P70662 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb1P70662 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb1P70662 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
Ldb1P70662 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.03□□□□□ -0.16
Ldb1P70662 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb1P70662 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb1P70662 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb1P70662 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb1P70662 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb1P70662 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb1P70662 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb1P70662 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ldb1P70662 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb1P70662 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb1P70662 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ldb1P70662 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb1P70662 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ldb1P70662 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ldb1P70662 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ldb1P70662 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ldb1P70662 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ldb1P70662 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.02□□□□□ -0.16
Ldb1P70662 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Ldb1P70662 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ldb1P70662 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ldb1P70662 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ldb1P70662 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ldb1P70662 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ldb1P70662 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ldb1P70662 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Ldb1P70662 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
Ldb1P70662 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ldb1P70662 Gm5566-201ENSMUST00000116118 459 ntBASIC14.02□□□□□ -0.17
Ldb1P70662 Gm6415-201ENSMUST00000118488 348 ntBASIC14.02□□□□□ -0.17
Ldb1P70662 Gm15957-201ENSMUST00000118893 974 ntBASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms