Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Six5P70178 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Six5P70178 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Six5P70178 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.21□□□□□ -0.3
Six5P70178 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.21□□□□□ -0.3
Six5P70178 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Six5P70178 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.2□□□□□ -0.3
Six5P70178 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Six5P70178 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.2□□□□□ -0.3
Six5P70178 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Six5P70178 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Six5P70178 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Six5P70178 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Six5P70178 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.2□□□□□ -0.3
Six5P70178 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Six5P70178 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Six5P70178 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Six5P70178 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Six5P70178 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Six5P70178 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.2□□□□□ -0.3
Six5P70178 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Six5P70178 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.2□□□□□ -0.3
Six5P70178 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.2□□□□□ -0.3
Six5P70178 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Six5P70178 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Six5P70178 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Six5P70178 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Six5P70178 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Six5P70178 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Six5P70178 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Six5P70178 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Six5P70178 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Six5P70178 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Six5P70178 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Six5P70178 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.2□□□□□ -0.3
Six5P70178 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Six5P70178 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Six5P70178 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Six5P70178 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.19□□□□□ -0.3
Six5P70178 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Six5P70178 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Six5P70178 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Six5P70178 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Six5P70178 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Six5P70178 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Six5P70178 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Six5P70178 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Six5P70178 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Six5P70178 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Six5P70178 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Six5P70178 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Six5P70178 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Six5P70178 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Six5P70178 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.19□□□□□ -0.3
Six5P70178 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.19□□□□□ -0.3
Six5P70178 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.19□□□□□ -0.3
Six5P70178 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.19□□□□□ -0.3
Six5P70178 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.19□□□□□ -0.3
Six5P70178 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Six5P70178 Gm5867-201ENSMUST00000063197 592 ntBASIC13.19□□□□□ -0.3
Six5P70178 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Six5P70178 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Six5P70178 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.19□□□□□ -0.3
Six5P70178 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Six5P70178 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Six5P70178 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Six5P70178 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Six5P70178 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Six5P70178 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Six5P70178 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Six5P70178 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Six5P70178 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Six5P70178 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Six5P70178 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Six5P70178 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Six5P70178 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Six5P70178 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Six5P70178 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.18□□□□□ -0.3
Six5P70178 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Six5P70178 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Six5P70178 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Six5P70178 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Six5P70178 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Six5P70178 Gm27680-201ENSMUST00000184192 160 ntBASIC13.18□□□□□ -0.3
Six5P70178 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.18□□□□□ -0.3
Six5P70178 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Six5P70178 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Six5P70178 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Six5P70178 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.18□□□□□ -0.3
Six5P70178 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Six5P70178 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Six5P70178 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Six5P70178 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Six5P70178 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Six5P70178 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Six5P70178 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Six5P70178 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Six5P70178 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Six5P70178 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Six5P70178 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms