Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ThraP63058 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
ThraP63058 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ThraP63058 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ThraP63058 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ThraP63058 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ThraP63058 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
ThraP63058 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
ThraP63058 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ThraP63058 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.29□□□□□ -0.12
ThraP63058 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ThraP63058 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ThraP63058 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ThraP63058 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ThraP63058 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ThraP63058 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
ThraP63058 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
ThraP63058 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
ThraP63058 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
ThraP63058 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ThraP63058 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ThraP63058 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
ThraP63058 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ThraP63058 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ThraP63058 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ThraP63058 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ThraP63058 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ThraP63058 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ThraP63058 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ThraP63058 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.28□□□□□ -0.12
ThraP63058 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
ThraP63058 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
ThraP63058 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.28□□□□□ -0.12
ThraP63058 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ThraP63058 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ThraP63058 Gm6888-201ENSMUST00000221983 706 ntBASIC14.28□□□□□ -0.12
ThraP63058 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ThraP63058 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ThraP63058 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ThraP63058 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ThraP63058 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ThraP63058 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
ThraP63058 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ThraP63058 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ThraP63058 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
ThraP63058 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ThraP63058 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ThraP63058 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ThraP63058 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ThraP63058 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.28□□□□□ -0.12
ThraP63058 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ThraP63058 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ThraP63058 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ThraP63058 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
ThraP63058 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ThraP63058 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ThraP63058 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ThraP63058 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ThraP63058 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
ThraP63058 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ThraP63058 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ThraP63058 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
ThraP63058 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
ThraP63058 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ThraP63058 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.27□□□□□ -0.12
ThraP63058 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ThraP63058 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ThraP63058 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
ThraP63058 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
ThraP63058 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ThraP63058 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ThraP63058 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ThraP63058 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ThraP63058 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.27□□□□□ -0.13
ThraP63058 Gm28630-201ENSMUST00000187806 498 ntBASIC14.27□□□□□ -0.13
ThraP63058 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.27□□□□□ -0.13
ThraP63058 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ThraP63058 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ThraP63058 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ThraP63058 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ThraP63058 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ThraP63058 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
ThraP63058 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ThraP63058 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ThraP63058 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ThraP63058 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
ThraP63058 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.27□□□□□ -0.13
ThraP63058 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
ThraP63058 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ThraP63058 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ThraP63058 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ThraP63058 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.26□□□□□ -0.13
ThraP63058 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ThraP63058 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ThraP63058 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
ThraP63058 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
ThraP63058 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ThraP63058 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ThraP63058 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ThraP63058 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms