Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm3P62311 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.81□□□□□ -0.36
Lsm3P62311 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Lsm3P62311 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm3P62311 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.81□□□□□ -0.36
Lsm3P62311 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Lsm3P62311 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.81□□□□□ -0.36
Lsm3P62311 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm3P62311 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.81□□□□□ -0.36
Lsm3P62311 Gm5587-201ENSMUST00000206270 674 ntBASIC12.81□□□□□ -0.36
Lsm3P62311 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm3P62311 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.81□□□□□ -0.36
Lsm3P62311 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm3P62311 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm3P62311 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm3P62311 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm3P62311 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm3P62311 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm3P62311 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm3P62311 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm3P62311 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Lsm3P62311 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Lsm3P62311 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm3P62311 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Lsm3P62311 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Lsm3P62311 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Lsm3P62311 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm3P62311 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm3P62311 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm3P62311 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm3P62311 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm3P62311 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm3P62311 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.81□□□□□ -0.36
Lsm3P62311 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Lsm3P62311 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm3P62311 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm3P62311 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm3P62311 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm3P62311 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.8□□□□□ -0.36
Lsm3P62311 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm3P62311 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm3P62311 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.8□□□□□ -0.36
Lsm3P62311 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm3P62311 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm3P62311 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
Lsm3P62311 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm3P62311 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm3P62311 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.8□□□□□ -0.36
Lsm3P62311 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm3P62311 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
Lsm3P62311 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm3P62311 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Lsm3P62311 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Lsm3P62311 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm3P62311 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm3P62311 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Lsm3P62311 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.8□□□□□ -0.36
Lsm3P62311 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm3P62311 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm3P62311 Gm8097-201ENSMUST00000117903 829 ntBASIC12.8□□□□□ -0.36
Lsm3P62311 Gm13464-201ENSMUST00000119418 935 ntBASIC12.8□□□□□ -0.36
Lsm3P62311 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC12.8□□□□□ -0.36
Lsm3P62311 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Lsm3P62311 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm3P62311 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Lsm3P62311 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Lsm3P62311 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.8□□□□□ -0.36
Lsm3P62311 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC12.8□□□□□ -0.36
Lsm3P62311 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm3P62311 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm3P62311 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.8□□□□□ -0.36
Lsm3P62311 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm3P62311 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm3P62311 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Lsm3P62311 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm3P62311 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm3P62311 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm3P62311 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm3P62311 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm3P62311 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm3P62311 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.8□□□□□ -0.36
Lsm3P62311 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm3P62311 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm3P62311 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Lsm3P62311 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.79□□□□□ -0.36
Lsm3P62311 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm3P62311 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm3P62311 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm3P62311 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm3P62311 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm3P62311 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm3P62311 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Lsm3P62311 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm3P62311 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm3P62311 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm3P62311 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm3P62311 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm3P62311 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm3P62311 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm3P62311 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms