Protein–RNA interactions for Protein: P60897

Sem1, 26S proteasome complex subunit SEM1, mousemouse

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sem1P60897 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sem1P60897 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Sem1P60897 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sem1P60897 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Sem1P60897 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sem1P60897 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sem1P60897 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sem1P60897 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sem1P60897 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Sem1P60897 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sem1P60897 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sem1P60897 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sem1P60897 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sem1P60897 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC13.17□□□□□ -0.3
Sem1P60897 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.17□□□□□ -0.3
Sem1P60897 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sem1P60897 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sem1P60897 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sem1P60897 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sem1P60897 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sem1P60897 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sem1P60897 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sem1P60897 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sem1P60897 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sem1P60897 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Sem1P60897 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sem1P60897 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sem1P60897 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Sem1P60897 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC13.16□□□□□ -0.3
Sem1P60897 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sem1P60897 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sem1P60897 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sem1P60897 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sem1P60897 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sem1P60897 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Sem1P60897 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC13.16□□□□□ -0.3
Sem1P60897 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sem1P60897 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Sem1P60897 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sem1P60897 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sem1P60897 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Sem1P60897 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sem1P60897 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sem1P60897 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.16□□□□□ -0.3
Sem1P60897 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sem1P60897 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sem1P60897 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Sem1P60897 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sem1P60897 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sem1P60897 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sem1P60897 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sem1P60897 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sem1P60897 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sem1P60897 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sem1P60897 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sem1P60897 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sem1P60897 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sem1P60897 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sem1P60897 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sem1P60897 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sem1P60897 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sem1P60897 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sem1P60897 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sem1P60897 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Sem1P60897 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sem1P60897 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sem1P60897 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Sem1P60897 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sem1P60897 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sem1P60897 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sem1P60897 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sem1P60897 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sem1P60897 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sem1P60897 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC13.15□□□□□ -0.3
Sem1P60897 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sem1P60897 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Sem1P60897 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Sem1P60897 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sem1P60897 Gm37292-201ENSMUST00000192062 758 ntBASIC13.15□□□□□ -0.3
Sem1P60897 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sem1P60897 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sem1P60897 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sem1P60897 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sem1P60897 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sem1P60897 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Sem1P60897 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC13.15□□□□□ -0.3
Sem1P60897 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sem1P60897 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sem1P60897 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Sem1P60897 Gm9544-201ENSMUST00000223349 2482 ntBASIC13.15□□□□□ -0.3
Sem1P60897 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sem1P60897 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sem1P60897 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.31
Sem1P60897 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sem1P60897 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sem1P60897 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sem1P60897 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sem1P60897 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Sem1P60897 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sem1P60897 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms