Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.5□□□□□ -0.41
Sf3b6P59708 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC12.5□□□□□ -0.41
Sf3b6P59708 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3b6P59708 AC154222.1-201ENSMUST00000223882 475 ntBASIC12.5□□□□□ -0.41
Sf3b6P59708 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3b6P59708 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3b6P59708 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Sf3b6P59708 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3b6P59708 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3b6P59708 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.5□□□□□ -0.41
Sf3b6P59708 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3b6P59708 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Sf3b6P59708 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Sf3b6P59708 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3b6P59708 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Sf3b6P59708 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3b6P59708 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3b6P59708 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Sf3b6P59708 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3b6P59708 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3b6P59708 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Sf3b6P59708 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3b6P59708 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Sf3b6P59708 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3b6P59708 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC12.49□□□□□ -0.41
Sf3b6P59708 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3b6P59708 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3b6P59708 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.49□□□□□ -0.41
Sf3b6P59708 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3b6P59708 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3b6P59708 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3b6P59708 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Sf3b6P59708 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Sf3b6P59708 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.49□□□□□ -0.41
Sf3b6P59708 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.49□□□□□ -0.41
Sf3b6P59708 AC084391.1-201ENSMUST00000200651 141 ntBASIC12.49□□□□□ -0.41
Sf3b6P59708 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.49□□□□□ -0.41
Sf3b6P59708 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.49□□□□□ -0.41
Sf3b6P59708 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.49□□□□□ -0.41
Sf3b6P59708 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.49□□□□□ -0.41
Sf3b6P59708 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3b6P59708 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3b6P59708 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3b6P59708 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3b6P59708 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3b6P59708 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3b6P59708 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3b6P59708 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3b6P59708 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3b6P59708 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3b6P59708 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sf3b6P59708 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Sf3b6P59708 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sf3b6P59708 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.48□□□□□ -0.41
Sf3b6P59708 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sf3b6P59708 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.48□□□□□ -0.41
Sf3b6P59708 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sf3b6P59708 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sf3b6P59708 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sf3b6P59708 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sf3b6P59708 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Sf3b6P59708 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sf3b6P59708 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sf3b6P59708 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sf3b6P59708 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sf3b6P59708 Gm14140-201ENSMUST00000119999 995 ntBASIC12.48□□□□□ -0.41
Sf3b6P59708 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.48□□□□□ -0.41
Sf3b6P59708 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.48□□□□□ -0.41
Sf3b6P59708 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.48□□□□□ -0.41
Sf3b6P59708 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC12.48□□□□□ -0.41
Sf3b6P59708 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sf3b6P59708 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sf3b6P59708 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sf3b6P59708 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.48□□□□□ -0.41
Sf3b6P59708 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sf3b6P59708 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sf3b6P59708 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sf3b6P59708 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sf3b6P59708 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Sf3b6P59708 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sf3b6P59708 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Sf3b6P59708 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.48□□□□□ -0.41
Sf3b6P59708 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sf3b6P59708 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3b6P59708 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.47□□□□□ -0.41
Sf3b6P59708 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Sf3b6P59708 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3b6P59708 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3b6P59708 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Sf3b6P59708 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3b6P59708 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3b6P59708 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3b6P59708 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3b6P59708 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.47□□□□□ -0.41
Sf3b6P59708 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.47□□□□□ -0.41
Sf3b6P59708 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3b6P59708 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3b6P59708 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Sf3b6P59708 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.47□□□□□ -0.41
Sf3b6P59708 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms