Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx6P54823 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx6P54823 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx6P54823 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx6P54823 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx6P54823 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.27□□□□□ -0.13
Ddx6P54823 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Ddx6P54823 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx6P54823 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx6P54823 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.26□□□□□ -0.13
Ddx6P54823 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx6P54823 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx6P54823 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx6P54823 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Ddx6P54823 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.26□□□□□ -0.13
Ddx6P54823 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx6P54823 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx6P54823 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx6P54823 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx6P54823 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ddx6P54823 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ddx6P54823 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.26□□□□□ -0.13
Ddx6P54823 Gm15371-201ENSMUST00000117057 784 ntBASIC14.26□□□□□ -0.13
Ddx6P54823 Gm12485-201ENSMUST00000119641 291 ntBASIC14.26□□□□□ -0.13
Ddx6P54823 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx6P54823 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.26□□□□□ -0.13
Ddx6P54823 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx6P54823 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.26□□□□□ -0.13
Ddx6P54823 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.26□□□□□ -0.13
Ddx6P54823 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ddx6P54823 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx6P54823 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.26□□□□□ -0.13
Ddx6P54823 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.26□□□□□ -0.13
Ddx6P54823 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.26□□□□□ -0.13
Ddx6P54823 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ddx6P54823 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx6P54823 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx6P54823 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx6P54823 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.26□□□□□ -0.13
Ddx6P54823 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.26□□□□□ -0.13
Ddx6P54823 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx6P54823 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx6P54823 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx6P54823 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.26□□□□□ -0.13
Ddx6P54823 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ddx6P54823 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx6P54823 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx6P54823 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx6P54823 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.26□□□□□ -0.13
Ddx6P54823 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx6P54823 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ddx6P54823 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx6P54823 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx6P54823 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.25□□□□□ -0.13
Ddx6P54823 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx6P54823 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.25□□□□□ -0.13
Ddx6P54823 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx6P54823 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx6P54823 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.25□□□□□ -0.13
Ddx6P54823 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.25□□□□□ -0.13
Ddx6P54823 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.25□□□□□ -0.13
Ddx6P54823 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx6P54823 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx6P54823 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx6P54823 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ddx6P54823 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx6P54823 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx6P54823 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx6P54823 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx6P54823 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ddx6P54823 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx6P54823 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx6P54823 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Ddx6P54823 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx6P54823 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx6P54823 Gm8463-201ENSMUST00000208573 613 ntBASIC14.25□□□□□ -0.13
Ddx6P54823 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.25□□□□□ -0.13
Ddx6P54823 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.25□□□□□ -0.13
Ddx6P54823 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx6P54823 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx6P54823 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx6P54823 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx6P54823 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx6P54823 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx6P54823 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx6P54823 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx6P54823 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx6P54823 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx6P54823 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx6P54823 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx6P54823 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Ddx6P54823 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx6P54823 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx6P54823 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ddx6P54823 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx6P54823 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx6P54823 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ddx6P54823 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx6P54823 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx6P54823 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms