Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RoraP51448 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RoraP51448 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RoraP51448 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RoraP51448 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RoraP51448 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
RoraP51448 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RoraP51448 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
RoraP51448 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RoraP51448 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
RoraP51448 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RoraP51448 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.32□□□□□ -0.28
RoraP51448 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RoraP51448 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
RoraP51448 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RoraP51448 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RoraP51448 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
RoraP51448 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.32□□□□□ -0.28
RoraP51448 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RoraP51448 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.32□□□□□ -0.28
RoraP51448 Gm15460-201ENSMUST00000118147 391 ntBASIC13.32□□□□□ -0.28
RoraP51448 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RoraP51448 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
RoraP51448 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.32□□□□□ -0.28
RoraP51448 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.32□□□□□ -0.28
RoraP51448 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
RoraP51448 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.32□□□□□ -0.28
RoraP51448 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RoraP51448 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RoraP51448 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.32□□□□□ -0.28
RoraP51448 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.32□□□□□ -0.28
RoraP51448 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.32□□□□□ -0.28
RoraP51448 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RoraP51448 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RoraP51448 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
RoraP51448 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
RoraP51448 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
RoraP51448 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
RoraP51448 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RoraP51448 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
RoraP51448 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RoraP51448 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RoraP51448 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.32□□□□□ -0.28
RoraP51448 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RoraP51448 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RoraP51448 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
RoraP51448 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RoraP51448 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
RoraP51448 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RoraP51448 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.32□□□□□ -0.28
RoraP51448 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RoraP51448 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
RoraP51448 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RoraP51448 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RoraP51448 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RoraP51448 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.31□□□□□ -0.28
RoraP51448 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RoraP51448 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RoraP51448 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RoraP51448 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RoraP51448 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.31□□□□□ -0.28
RoraP51448 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RoraP51448 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RoraP51448 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RoraP51448 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
RoraP51448 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.31□□□□□ -0.28
RoraP51448 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RoraP51448 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RoraP51448 Gm15957-201ENSMUST00000118893 974 ntBASIC13.31□□□□□ -0.28
RoraP51448 Gm12134-201ENSMUST00000122109 520 ntBASIC13.31□□□□□ -0.28
RoraP51448 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.31□□□□□ -0.28
RoraP51448 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RoraP51448 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
RoraP51448 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RoraP51448 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
RoraP51448 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RoraP51448 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RoraP51448 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RoraP51448 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RoraP51448 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RoraP51448 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.31□□□□□ -0.28
RoraP51448 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RoraP51448 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.31□□□□□ -0.28
RoraP51448 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
RoraP51448 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RoraP51448 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
RoraP51448 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
RoraP51448 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RoraP51448 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RoraP51448 Gm15393-201ENSMUST00000120499 219 ntBASIC13.3□□□□□ -0.28
RoraP51448 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RoraP51448 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.3□□□□□ -0.28
RoraP51448 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
RoraP51448 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.3□□□□□ -0.28
RoraP51448 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
RoraP51448 Gm9794-201ENSMUST00000202370 423 ntBASIC13.3□□□□□ -0.28
RoraP51448 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RoraP51448 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RoraP51448 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
RoraP51448 Gm9797-201ENSMUST00000052902 613 ntBASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms