Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Gm21769-201ENSMUST00000211922 111 ntBASIC15.52■□□□□ 0.07
Brca1P48754 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Brca1P48754 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
Brca1P48754 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Brca1P48754 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Brca1P48754 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Brca1P48754 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Brca1P48754 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Brca1P48754 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Brca1P48754 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Brca1P48754 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC15.51■□□□□ 0.07
Brca1P48754 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Brca1P48754 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Brca1P48754 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC15.51■□□□□ 0.07
Brca1P48754 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC15.51■□□□□ 0.07
Brca1P48754 Gm10268-201ENSMUST00000085340 555 ntBASIC15.51■□□□□ 0.07
Brca1P48754 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Brca1P48754 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC15.51■□□□□ 0.07
Brca1P48754 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Brca1P48754 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Brca1P48754 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Brca1P48754 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Brca1P48754 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Brca1P48754 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.51■□□□□ 0.07
Brca1P48754 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Brca1P48754 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.51■□□□□ 0.07
Brca1P48754 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Brca1P48754 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Brca1P48754 Gm24255-201ENSMUST00000104481 128 ntBASIC15.5■□□□□ 0.07
Brca1P48754 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC15.5■□□□□ 0.07
Brca1P48754 Gm16479-201ENSMUST00000121706 932 ntBASIC15.5■□□□□ 0.07
Brca1P48754 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC15.5■□□□□ 0.07
Brca1P48754 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC15.5■□□□□ 0.07
Brca1P48754 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC15.5■□□□□ 0.07
Brca1P48754 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
Brca1P48754 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Brca1P48754 Gm29787-201ENSMUST00000222129 849 ntBASIC15.5■□□□□ 0.07
Brca1P48754 Gm2824-203ENSMUST00000226189 1228 ntBASIC15.5■□□□□ 0.07
Brca1P48754 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Brca1P48754 Gm45684-201ENSMUST00000210244 1571 ntBASIC15.5■□□□□ 0.07
Brca1P48754 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Brca1P48754 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Brca1P48754 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Brca1P48754 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Brca1P48754 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
Brca1P48754 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC15.5■□□□□ 0.07
Brca1P48754 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Brca1P48754 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Brca1P48754 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Brca1P48754 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC15.5■□□□□ 0.07
Brca1P48754 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Brca1P48754 Gm15782-201ENSMUST00000121073 445 ntBASIC15.5■□□□□ 0.07
Brca1P48754 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC15.5■□□□□ 0.07
Brca1P48754 Gm16379-201ENSMUST00000161469 348 ntBASIC15.5■□□□□ 0.07
Brca1P48754 Gm8762-201ENSMUST00000193486 339 ntBASIC15.5■□□□□ 0.07
Brca1P48754 CT030182.1-201ENSMUST00000225935 533 ntBASIC15.5■□□□□ 0.07
Brca1P48754 CT573086.1-201ENSMUST00000227202 1074 ntBASIC15.5■□□□□ 0.07
Brca1P48754 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Brca1P48754 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Brca1P48754 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC15.49■□□□□ 0.07
Brca1P48754 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Brca1P48754 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Brca1P48754 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Brca1P48754 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Brca1P48754 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.49■□□□□ 0.07
Brca1P48754 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Brca1P48754 Gm43289-201ENSMUST00000200537 1475 ntBASIC15.49■□□□□ 0.07
Brca1P48754 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Brca1P48754 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC15.49■□□□□ 0.07
Brca1P48754 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Brca1P48754 Gm13369-201ENSMUST00000119442 987 ntBASIC15.49■□□□□ 0.07
Brca1P48754 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC15.49■□□□□ 0.07
Brca1P48754 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC15.49■□□□□ 0.07
Brca1P48754 Gm27341-201ENSMUST00000183570 106 ntBASIC15.49■□□□□ 0.07
Brca1P48754 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
Brca1P48754 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Brca1P48754 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Brca1P48754 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Brca1P48754 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Brca1P48754 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Brca1P48754 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Brca1P48754 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Brca1P48754 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC15.49■□□□□ 0.07
Brca1P48754 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Brca1P48754 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC15.48■□□□□ 0.07
Brca1P48754 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Brca1P48754 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Brca1P48754 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Brca1P48754 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Brca1P48754 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Brca1P48754 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Brca1P48754 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Brca1P48754 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Brca1P48754 Gm15370-201ENSMUST00000117158 253 ntBASIC15.48■□□□□ 0.07
Brca1P48754 Gm25261-201ENSMUST00000157416 134 ntBASIC15.48■□□□□ 0.07
Brca1P48754 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC15.48■□□□□ 0.07
Brca1P48754 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC15.48■□□□□ 0.07
Brca1P48754 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC15.48■□□□□ 0.07
Brca1P48754 Gm8227-201ENSMUST00000223306 571 ntBASIC15.48■□□□□ 0.07
Brca1P48754 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms