Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GdnfP48540 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GdnfP48540 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GdnfP48540 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
GdnfP48540 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
GdnfP48540 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
GdnfP48540 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
GdnfP48540 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
GdnfP48540 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
GdnfP48540 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
GdnfP48540 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GdnfP48540 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GdnfP48540 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GdnfP48540 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
GdnfP48540 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
GdnfP48540 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
GdnfP48540 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
GdnfP48540 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
GdnfP48540 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GdnfP48540 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
GdnfP48540 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
GdnfP48540 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
GdnfP48540 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
GdnfP48540 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
GdnfP48540 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GdnfP48540 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
GdnfP48540 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.34□□□□□ -0.43
GdnfP48540 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
GdnfP48540 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
GdnfP48540 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GdnfP48540 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
GdnfP48540 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GdnfP48540 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
GdnfP48540 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
GdnfP48540 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
GdnfP48540 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GdnfP48540 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
GdnfP48540 Gm9385-201ENSMUST00000117563 472 ntBASIC12.34□□□□□ -0.43
GdnfP48540 Gm14494-201ENSMUST00000118786 435 ntBASIC12.34□□□□□ -0.43
GdnfP48540 Gm15467-201ENSMUST00000120582 445 ntBASIC12.34□□□□□ -0.43
GdnfP48540 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.34□□□□□ -0.43
GdnfP48540 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC12.34□□□□□ -0.43
GdnfP48540 Gm44492-201ENSMUST00000197012 141 ntBASIC12.34□□□□□ -0.43
GdnfP48540 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC12.34□□□□□ -0.43
GdnfP48540 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.34□□□□□ -0.43
GdnfP48540 Gm43371-201ENSMUST00000202838 1031 ntBASIC12.34□□□□□ -0.43
GdnfP48540 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GdnfP48540 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GdnfP48540 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GdnfP48540 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
GdnfP48540 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GdnfP48540 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
GdnfP48540 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GdnfP48540 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GdnfP48540 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
GdnfP48540 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GdnfP48540 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GdnfP48540 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GdnfP48540 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
GdnfP48540 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GdnfP48540 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GdnfP48540 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GdnfP48540 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
GdnfP48540 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
GdnfP48540 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.33□□□□□ -0.43
GdnfP48540 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
GdnfP48540 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
GdnfP48540 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
GdnfP48540 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
GdnfP48540 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
GdnfP48540 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
GdnfP48540 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
GdnfP48540 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
GdnfP48540 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
GdnfP48540 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
GdnfP48540 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
GdnfP48540 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
GdnfP48540 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
GdnfP48540 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.33□□□□□ -0.44
GdnfP48540 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
GdnfP48540 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
GdnfP48540 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
GdnfP48540 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
GdnfP48540 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.33□□□□□ -0.44
GdnfP48540 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.33□□□□□ -0.44
GdnfP48540 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
GdnfP48540 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
GdnfP48540 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
GdnfP48540 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
GdnfP48540 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.33□□□□□ -0.44
GdnfP48540 Gm43514-201ENSMUST00000198852 424 ntBASIC12.33□□□□□ -0.44
GdnfP48540 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.33□□□□□ -0.44
GdnfP48540 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
GdnfP48540 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
GdnfP48540 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
GdnfP48540 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
GdnfP48540 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
GdnfP48540 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
GdnfP48540 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
GdnfP48540 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms