Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC13.52□□□□□ -0.25
Sox18P43680 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox18P43680 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
Sox18P43680 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sox18P43680 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sox18P43680 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox18P43680 Gm17795-201ENSMUST00000214505 757 ntBASIC13.52□□□□□ -0.25
Sox18P43680 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.52□□□□□ -0.25
Sox18P43680 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.52□□□□□ -0.25
Sox18P43680 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Sox18P43680 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sox18P43680 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox18P43680 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox18P43680 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox18P43680 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox18P43680 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox18P43680 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sox18P43680 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox18P43680 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox18P43680 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.52□□□□□ -0.25
Sox18P43680 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox18P43680 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox18P43680 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox18P43680 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox18P43680 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Sox18P43680 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sox18P43680 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox18P43680 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Sox18P43680 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox18P43680 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox18P43680 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox18P43680 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.51□□□□□ -0.25
Sox18P43680 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox18P43680 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox18P43680 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox18P43680 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Sox18P43680 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox18P43680 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sox18P43680 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox18P43680 Gm29649-201ENSMUST00000185649 419 ntBASIC13.51□□□□□ -0.25
Sox18P43680 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.51□□□□□ -0.25
Sox18P43680 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC13.51□□□□□ -0.25
Sox18P43680 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.51□□□□□ -0.25
Sox18P43680 Gm37466-201ENSMUST00000195692 652 ntBASIC13.51□□□□□ -0.25
Sox18P43680 Gm18056-201ENSMUST00000207670 568 ntBASIC13.51□□□□□ -0.25
Sox18P43680 Gm18061-201ENSMUST00000208350 562 ntBASIC13.51□□□□□ -0.25
Sox18P43680 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.51□□□□□ -0.25
Sox18P43680 Gm18063-201ENSMUST00000208529 568 ntBASIC13.51□□□□□ -0.25
Sox18P43680 Gm18052-201ENSMUST00000208750 559 ntBASIC13.51□□□□□ -0.25
Sox18P43680 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox18P43680 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC13.51□□□□□ -0.25
Sox18P43680 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox18P43680 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.51□□□□□ -0.25
Sox18P43680 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox18P43680 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox18P43680 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sox18P43680 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox18P43680 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox18P43680 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sox18P43680 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
Sox18P43680 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Sox18P43680 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox18P43680 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox18P43680 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox18P43680 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sox18P43680 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox18P43680 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.51□□□□□ -0.25
Sox18P43680 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox18P43680 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox18P43680 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sox18P43680 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Sox18P43680 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.5□□□□□ -0.25
Sox18P43680 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox18P43680 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox18P43680 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.5□□□□□ -0.25
Sox18P43680 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.5□□□□□ -0.25
Sox18P43680 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.5□□□□□ -0.25
Sox18P43680 Gm23931-201ENSMUST00000103842 109 ntBASIC13.5□□□□□ -0.25
Sox18P43680 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sox18P43680 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox18P43680 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sox18P43680 Gm37230-201ENSMUST00000194491 818 ntBASIC13.5□□□□□ -0.25
Sox18P43680 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.5□□□□□ -0.25
Sox18P43680 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC13.5□□□□□ -0.25
Sox18P43680 Gm18054-201ENSMUST00000207539 555 ntBASIC13.5□□□□□ -0.25
Sox18P43680 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox18P43680 CT010431.1-201ENSMUST00000221249 1080 ntBASIC13.5□□□□□ -0.25
Sox18P43680 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox18P43680 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox18P43680 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox18P43680 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Sox18P43680 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.5□□□□□ -0.25
Sox18P43680 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox18P43680 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox18P43680 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Sox18P43680 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox18P43680 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox18P43680 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox18P43680 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox18P43680 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms