Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Tnfsf4P43488 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf4P43488 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf4P43488 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.59□□□□□ -0.23
Tnfsf4P43488 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf4P43488 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.59□□□□□ -0.23
Tnfsf4P43488 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.59□□□□□ -0.23
Tnfsf4P43488 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf4P43488 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf4P43488 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf4P43488 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Tnfsf4P43488 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf4P43488 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf4P43488 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf4P43488 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf4P43488 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf4P43488 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf4P43488 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfsf4P43488 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Tnfsf4P43488 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Tnfsf4P43488 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.58□□□□□ -0.23
Tnfsf4P43488 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.23
Tnfsf4P43488 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Tnfsf4P43488 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfsf4P43488 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfsf4P43488 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfsf4P43488 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.58□□□□□ -0.24
Tnfsf4P43488 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfsf4P43488 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfsf4P43488 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.58□□□□□ -0.24
Tnfsf4P43488 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Tnfsf4P43488 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.58□□□□□ -0.24
Tnfsf4P43488 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfsf4P43488 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.58□□□□□ -0.24
Tnfsf4P43488 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.58□□□□□ -0.24
Tnfsf4P43488 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.58□□□□□ -0.24
Tnfsf4P43488 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.58□□□□□ -0.24
Tnfsf4P43488 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.58□□□□□ -0.24
Tnfsf4P43488 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfsf4P43488 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfsf4P43488 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.58□□□□□ -0.24
Tnfsf4P43488 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Tnfsf4P43488 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfsf4P43488 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Tnfsf4P43488 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Tnfsf4P43488 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
Tnfsf4P43488 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfsf4P43488 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfsf4P43488 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfsf4P43488 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfsf4P43488 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfsf4P43488 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfsf4P43488 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfsf4P43488 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfsf4P43488 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfsf4P43488 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.58□□□□□ -0.24
Tnfsf4P43488 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfsf4P43488 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.58□□□□□ -0.24
Tnfsf4P43488 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Tnfsf4P43488 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfsf4P43488 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfsf4P43488 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfsf4P43488 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfsf4P43488 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfsf4P43488 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Tnfsf4P43488 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfsf4P43488 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Tnfsf4P43488 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfsf4P43488 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Tnfsf4P43488 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfsf4P43488 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Tnfsf4P43488 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfsf4P43488 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfsf4P43488 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfsf4P43488 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfsf4P43488 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfsf4P43488 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfsf4P43488 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfsf4P43488 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.57□□□□□ -0.24
Tnfsf4P43488 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.57□□□□□ -0.24
Tnfsf4P43488 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.57□□□□□ -0.24
Tnfsf4P43488 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.57□□□□□ -0.24
Tnfsf4P43488 Gm11025-201ENSMUST00000140773 466 ntBASIC13.57□□□□□ -0.24
Tnfsf4P43488 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfsf4P43488 Gm18737-201ENSMUST00000173594 937 ntBASIC13.57□□□□□ -0.24
Tnfsf4P43488 Mir3113-201ENSMUST00000175478 76 ntBASIC13.57□□□□□ -0.24
Tnfsf4P43488 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.57□□□□□ -0.24
Tnfsf4P43488 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.57□□□□□ -0.24
Tnfsf4P43488 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Tnfsf4P43488 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfsf4P43488 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.57□□□□□ -0.24
Tnfsf4P43488 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfsf4P43488 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfsf4P43488 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfsf4P43488 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfsf4P43488 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfsf4P43488 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.57□□□□□ -0.24
Tnfsf4P43488 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfsf4P43488 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Tnfsf4P43488 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms