Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hist1h1aP43275 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Hist1h1aP43275 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hist1h1aP43275 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.64□□□□□ -0.55
Hist1h1aP43275 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hist1h1aP43275 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.64□□□□□ -0.55
Hist1h1aP43275 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
Hist1h1aP43275 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hist1h1aP43275 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.64□□□□□ -0.55
Hist1h1aP43275 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hist1h1aP43275 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Hist1h1aP43275 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
Hist1h1aP43275 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hist1h1aP43275 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Hist1h1aP43275 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist1h1aP43275 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Hist1h1aP43275 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist1h1aP43275 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist1h1aP43275 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist1h1aP43275 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC11.63□□□□□ -0.55
Hist1h1aP43275 Gm13233-201ENSMUST00000118760 1443 ntBASIC11.63□□□□□ -0.55
Hist1h1aP43275 Gm13244-201ENSMUST00000118855 1446 ntBASIC11.63□□□□□ -0.55
Hist1h1aP43275 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist1h1aP43275 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist1h1aP43275 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.63□□□□□ -0.55
Hist1h1aP43275 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Hist1h1aP43275 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist1h1aP43275 Gm12350-201ENSMUST00000121208 462 ntBASIC11.63□□□□□ -0.55
Hist1h1aP43275 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Hist1h1aP43275 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist1h1aP43275 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Hist1h1aP43275 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist1h1aP43275 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC11.63□□□□□ -0.55
Hist1h1aP43275 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC11.63□□□□□ -0.55
Hist1h1aP43275 Gm2651-201ENSMUST00000203560 838 ntBASIC11.63□□□□□ -0.55
Hist1h1aP43275 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC11.63□□□□□ -0.55
Hist1h1aP43275 AC138767.1-201ENSMUST00000222661 415 ntBASIC11.63□□□□□ -0.55
Hist1h1aP43275 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC11.63□□□□□ -0.55
Hist1h1aP43275 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Hist1h1aP43275 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist1h1aP43275 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Hist1h1aP43275 Gm9252-201ENSMUST00000172364 1602 ntBASIC11.63□□□□□ -0.55
Hist1h1aP43275 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.63□□□□□ -0.55
Hist1h1aP43275 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist1h1aP43275 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist1h1aP43275 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist1h1aP43275 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist1h1aP43275 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist1h1aP43275 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist1h1aP43275 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist1h1aP43275 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist1h1aP43275 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist1h1aP43275 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist1h1aP43275 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Hist1h1aP43275 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC11.63□□□□□ -0.55
Hist1h1aP43275 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Hist1h1aP43275 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC11.63□□□□□ -0.55
Hist1h1aP43275 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hist1h1aP43275 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Hist1h1aP43275 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hist1h1aP43275 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hist1h1aP43275 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hist1h1aP43275 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hist1h1aP43275 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Hist1h1aP43275 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hist1h1aP43275 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hist1h1aP43275 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hist1h1aP43275 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.62□□□□□ -0.55
Hist1h1aP43275 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hist1h1aP43275 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hist1h1aP43275 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hist1h1aP43275 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Hist1h1aP43275 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hist1h1aP43275 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hist1h1aP43275 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hist1h1aP43275 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hist1h1aP43275 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hist1h1aP43275 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hist1h1aP43275 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hist1h1aP43275 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Hist1h1aP43275 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC11.62□□□□□ -0.55
Hist1h1aP43275 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC11.62□□□□□ -0.55
Hist1h1aP43275 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Hist1h1aP43275 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC11.62□□□□□ -0.55
Hist1h1aP43275 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC11.62□□□□□ -0.55
Hist1h1aP43275 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hist1h1aP43275 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hist1h1aP43275 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hist1h1aP43275 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Hist1h1aP43275 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hist1h1aP43275 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC11.62□□□□□ -0.55
Hist1h1aP43275 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hist1h1aP43275 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hist1h1aP43275 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hist1h1aP43275 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Hist1h1aP43275 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Hist1h1aP43275 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hist1h1aP43275 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hist1h1aP43275 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Hist1h1aP43275 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms