Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HttP42859 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HttP42859 Gm13665-201ENSMUST00000120830 528 ntBASIC14.64□□□□□ -0.07
HttP42859 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC14.64□□□□□ -0.07
HttP42859 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
HttP42859 Gm18893-201ENSMUST00000198416 943 ntBASIC14.64□□□□□ -0.07
HttP42859 Gm18393-201ENSMUST00000208349 1131 ntBASIC14.64□□□□□ -0.07
HttP42859 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HttP42859 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HttP42859 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.63□□□□□ -0.07
HttP42859 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
HttP42859 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HttP42859 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
HttP42859 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.63□□□□□ -0.07
HttP42859 Gm10434-201ENSMUST00000101158 471 ntBASIC14.63□□□□□ -0.07
HttP42859 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
HttP42859 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
HttP42859 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HttP42859 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
HttP42859 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HttP42859 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HttP42859 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HttP42859 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HttP42859 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
HttP42859 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC14.63□□□□□ -0.07
HttP42859 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HttP42859 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC14.63□□□□□ -0.07
HttP42859 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC14.63□□□□□ -0.07
HttP42859 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HttP42859 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HttP42859 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HttP42859 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
HttP42859 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HttP42859 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HttP42859 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
HttP42859 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HttP42859 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HttP42859 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HttP42859 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HttP42859 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
HttP42859 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HttP42859 Gm9279-201ENSMUST00000223175 1606 ntBASIC14.62□□□□□ -0.07
HttP42859 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HttP42859 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
HttP42859 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
HttP42859 Mir6958-201ENSMUST00000184207 73 ntBASIC14.62□□□□□ -0.07
HttP42859 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC14.62□□□□□ -0.07
HttP42859 Gm44967-201ENSMUST00000207047 631 ntBASIC14.62□□□□□ -0.07
HttP42859 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC14.62□□□□□ -0.07
HttP42859 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
HttP42859 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
HttP42859 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
HttP42859 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HttP42859 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HttP42859 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
HttP42859 Gm8885-201ENSMUST00000189382 598 ntBASIC14.62□□□□□ -0.07
HttP42859 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC14.62□□□□□ -0.07
HttP42859 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC14.62□□□□□ -0.07
HttP42859 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.62□□□□□ -0.07
HttP42859 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC14.62□□□□□ -0.07
HttP42859 Gm19163-201ENSMUST00000223313 780 ntBASIC14.62□□□□□ -0.07
HttP42859 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC14.62□□□□□ -0.07
HttP42859 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HttP42859 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HttP42859 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.62□□□□□ -0.07
HttP42859 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
HttP42859 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
HttP42859 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
HttP42859 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
HttP42859 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.62□□□□□ -0.07
HttP42859 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.62□□□□□ -0.07
HttP42859 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.62□□□□□ -0.07
HttP42859 AC167669.2-201ENSMUST00000224417 1620 ntBASIC14.62□□□□□ -0.07
HttP42859 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
HttP42859 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
HttP42859 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HttP42859 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.62□□□□□ -0.07
HttP42859 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HttP42859 Gm14665-201ENSMUST00000122294 557 ntBASIC14.61□□□□□ -0.07
HttP42859 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HttP42859 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC14.61□□□□□ -0.07
HttP42859 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC14.61□□□□□ -0.07
HttP42859 Gm27552-201ENSMUST00000183351 62 ntBASIC14.61□□□□□ -0.07
HttP42859 Gm27844-201ENSMUST00000183613 62 ntBASIC14.61□□□□□ -0.07
HttP42859 Gm8385-201ENSMUST00000058999 643 ntBASIC14.61□□□□□ -0.07
HttP42859 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HttP42859 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HttP42859 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HttP42859 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
HttP42859 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
HttP42859 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HttP42859 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HttP42859 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
HttP42859 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HttP42859 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HttP42859 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
HttP42859 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
HttP42859 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HttP42859 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.61□□□□□ -0.07
HttP42859 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms