Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
TfamP40630 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
TfamP40630 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TfamP40630 Gm10175-201ENSMUST00000086013 645 ntBASIC13.65□□□□□ -0.22
TfamP40630 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TfamP40630 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TfamP40630 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TfamP40630 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TfamP40630 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TfamP40630 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TfamP40630 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TfamP40630 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TfamP40630 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TfamP40630 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TfamP40630 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TfamP40630 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TfamP40630 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TfamP40630 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TfamP40630 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
TfamP40630 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TfamP40630 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TfamP40630 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
TfamP40630 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TfamP40630 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TfamP40630 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TfamP40630 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TfamP40630 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TfamP40630 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.64□□□□□ -0.23
TfamP40630 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TfamP40630 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
TfamP40630 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
TfamP40630 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TfamP40630 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TfamP40630 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.64□□□□□ -0.23
TfamP40630 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TfamP40630 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TfamP40630 Gm2810-201ENSMUST00000118681 990 ntBASIC13.64□□□□□ -0.23
TfamP40630 Gm12882-201ENSMUST00000121696 517 ntBASIC13.64□□□□□ -0.23
TfamP40630 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.64□□□□□ -0.23
TfamP40630 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.64□□□□□ -0.23
TfamP40630 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.64□□□□□ -0.23
TfamP40630 Gm45612-201ENSMUST00000211320 160 ntBASIC13.64□□□□□ -0.23
TfamP40630 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TfamP40630 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.64□□□□□ -0.23
TfamP40630 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TfamP40630 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TfamP40630 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TfamP40630 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TfamP40630 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.64□□□□□ -0.23
TfamP40630 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TfamP40630 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TfamP40630 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TfamP40630 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.63□□□□□ -0.23
TfamP40630 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TfamP40630 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
TfamP40630 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TfamP40630 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
TfamP40630 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TfamP40630 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TfamP40630 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TfamP40630 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.63□□□□□ -0.23
TfamP40630 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TfamP40630 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
TfamP40630 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TfamP40630 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TfamP40630 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TfamP40630 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TfamP40630 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.63□□□□□ -0.23
TfamP40630 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TfamP40630 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.63□□□□□ -0.23
TfamP40630 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TfamP40630 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TfamP40630 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TfamP40630 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
TfamP40630 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TfamP40630 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TfamP40630 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TfamP40630 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TfamP40630 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TfamP40630 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TfamP40630 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TfamP40630 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TfamP40630 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
TfamP40630 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
TfamP40630 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
TfamP40630 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
TfamP40630 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.62□□□□□ -0.23
TfamP40630 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TfamP40630 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TfamP40630 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
TfamP40630 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TfamP40630 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TfamP40630 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
TfamP40630 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
TfamP40630 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
TfamP40630 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TfamP40630 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TfamP40630 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TfamP40630 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
TfamP40630 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms