Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxa1P35582 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.03□□□□□ -0.32
Foxa1P35582 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Foxa1P35582 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.03□□□□□ -0.32
Foxa1P35582 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Foxa1P35582 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Foxa1P35582 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxa1P35582 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Foxa1P35582 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxa1P35582 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxa1P35582 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Foxa1P35582 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxa1P35582 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.02□□□□□ -0.32
Foxa1P35582 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Foxa1P35582 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.02□□□□□ -0.32
Foxa1P35582 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Foxa1P35582 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Foxa1P35582 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Foxa1P35582 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Foxa1P35582 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Foxa1P35582 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Foxa1P35582 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Foxa1P35582 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Foxa1P35582 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Foxa1P35582 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.02□□□□□ -0.33
Foxa1P35582 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.02□□□□□ -0.33
Foxa1P35582 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.02□□□□□ -0.33
Foxa1P35582 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Foxa1P35582 Gm27680-201ENSMUST00000184192 160 ntBASIC13.02□□□□□ -0.33
Foxa1P35582 Gm33320-201ENSMUST00000192232 530 ntBASIC13.02□□□□□ -0.33
Foxa1P35582 Gm9229-201ENSMUST00000222777 126 ntBASIC13.02□□□□□ -0.33
Foxa1P35582 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.02□□□□□ -0.33
Foxa1P35582 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Foxa1P35582 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Foxa1P35582 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Foxa1P35582 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Foxa1P35582 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Foxa1P35582 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Foxa1P35582 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Foxa1P35582 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Foxa1P35582 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.02□□□□□ -0.33
Foxa1P35582 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Foxa1P35582 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Foxa1P35582 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Foxa1P35582 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Foxa1P35582 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Foxa1P35582 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Foxa1P35582 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Foxa1P35582 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.01□□□□□ -0.33
Foxa1P35582 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa1P35582 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa1P35582 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa1P35582 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa1P35582 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa1P35582 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa1P35582 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Foxa1P35582 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.01□□□□□ -0.33
Foxa1P35582 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa1P35582 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa1P35582 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Foxa1P35582 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa1P35582 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa1P35582 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa1P35582 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.01□□□□□ -0.33
Foxa1P35582 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.01□□□□□ -0.33
Foxa1P35582 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.01□□□□□ -0.33
Foxa1P35582 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa1P35582 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Foxa1P35582 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa1P35582 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa1P35582 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa1P35582 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Foxa1P35582 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa1P35582 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
Foxa1P35582 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa1P35582 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Foxa1P35582 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa1P35582 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa1P35582 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa1P35582 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa1P35582 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa1P35582 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa1P35582 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa1P35582 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.01□□□□□ -0.33
Foxa1P35582 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa1P35582 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa1P35582 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa1P35582 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa1P35582 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa1P35582 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa1P35582 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa1P35582 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Foxa1P35582 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Foxa1P35582 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Foxa1P35582 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Foxa1P35582 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13□□□□□ -0.33
Foxa1P35582 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Foxa1P35582 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Foxa1P35582 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13□□□□□ -0.33
Foxa1P35582 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms