Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Slc6a11P31650 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Slc6a11P31650 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Slc6a11P31650 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc6a11P31650 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.39□□□□□ -0.27
Slc6a11P31650 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Slc6a11P31650 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc6a11P31650 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc6a11P31650 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc6a11P31650 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.39□□□□□ -0.27
Slc6a11P31650 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc6a11P31650 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc6a11P31650 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc6a11P31650 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc6a11P31650 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Slc6a11P31650 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.39□□□□□ -0.27
Slc6a11P31650 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.39□□□□□ -0.27
Slc6a11P31650 Gm10253-201ENSMUST00000194270 940 ntBASIC13.39□□□□□ -0.27
Slc6a11P31650 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.39□□□□□ -0.27
Slc6a11P31650 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Slc6a11P31650 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc6a11P31650 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc6a11P31650 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Slc6a11P31650 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Slc6a11P31650 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc6a11P31650 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Slc6a11P31650 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc6a11P31650 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Slc6a11P31650 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc6a11P31650 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc6a11P31650 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.39□□□□□ -0.27
Slc6a11P31650 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc6a11P31650 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc6a11P31650 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc6a11P31650 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Slc6a11P31650 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Slc6a11P31650 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Slc6a11P31650 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc6a11P31650 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc6a11P31650 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Slc6a11P31650 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc6a11P31650 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc6a11P31650 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Slc6a11P31650 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc6a11P31650 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc6a11P31650 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc6a11P31650 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Slc6a11P31650 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Slc6a11P31650 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc6a11P31650 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Slc6a11P31650 Gm27622-201ENSMUST00000183779 60 ntBASIC13.38□□□□□ -0.27
Slc6a11P31650 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.38□□□□□ -0.27
Slc6a11P31650 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.38□□□□□ -0.27
Slc6a11P31650 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.38□□□□□ -0.27
Slc6a11P31650 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Slc6a11P31650 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc6a11P31650 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.38□□□□□ -0.27
Slc6a11P31650 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Slc6a11P31650 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Slc6a11P31650 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Slc6a11P31650 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Slc6a11P31650 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Slc6a11P31650 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Slc6a11P31650 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Slc6a11P31650 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Slc6a11P31650 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a11P31650 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.37□□□□□ -0.27
Slc6a11P31650 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a11P31650 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a11P31650 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a11P31650 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a11P31650 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.37□□□□□ -0.27
Slc6a11P31650 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a11P31650 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a11P31650 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.37□□□□□ -0.27
Slc6a11P31650 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a11P31650 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.37□□□□□ -0.27
Slc6a11P31650 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.37□□□□□ -0.27
Slc6a11P31650 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.37□□□□□ -0.27
Slc6a11P31650 Gm24158-201ENSMUST00000175263 71 ntBASIC13.37□□□□□ -0.27
Slc6a11P31650 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.37□□□□□ -0.27
Slc6a11P31650 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Slc6a11P31650 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a11P31650 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a11P31650 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a11P31650 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a11P31650 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a11P31650 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a11P31650 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a11P31650 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a11P31650 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a11P31650 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Slc6a11P31650 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.37□□□□□ -0.27
Slc6a11P31650 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a11P31650 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.37□□□□□ -0.27
Slc6a11P31650 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a11P31650 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a11P31650 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a11P31650 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.37□□□□□ -0.27
Slc6a11P31650 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms