Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13□□□□□ -0.33
Nedd8P29595 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Nedd8P29595 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Nedd8P29595 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Nedd8P29595 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nedd8P29595 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nedd8P29595 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Nedd8P29595 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nedd8P29595 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nedd8P29595 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nedd8P29595 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nedd8P29595 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nedd8P29595 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nedd8P29595 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nedd8P29595 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Nedd8P29595 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nedd8P29595 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nedd8P29595 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nedd8P29595 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Nedd8P29595 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.99□□□□□ -0.33
Nedd8P29595 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nedd8P29595 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC12.99□□□□□ -0.33
Nedd8P29595 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Nedd8P29595 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.99□□□□□ -0.33
Nedd8P29595 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nedd8P29595 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nedd8P29595 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Nedd8P29595 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nedd8P29595 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.99□□□□□ -0.33
Nedd8P29595 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nedd8P29595 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.99□□□□□ -0.33
Nedd8P29595 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nedd8P29595 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nedd8P29595 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nedd8P29595 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.99□□□□□ -0.33
Nedd8P29595 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nedd8P29595 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nedd8P29595 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nedd8P29595 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.98□□□□□ -0.33
Nedd8P29595 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nedd8P29595 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nedd8P29595 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nedd8P29595 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nedd8P29595 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nedd8P29595 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nedd8P29595 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nedd8P29595 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nedd8P29595 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nedd8P29595 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nedd8P29595 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nedd8P29595 Gm10013-201ENSMUST00000106074 672 ntBASIC12.98□□□□□ -0.33
Nedd8P29595 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nedd8P29595 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.98□□□□□ -0.33
Nedd8P29595 Gm27867-201ENSMUST00000184778 125 ntBASIC12.98□□□□□ -0.33
Nedd8P29595 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Nedd8P29595 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nedd8P29595 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nedd8P29595 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nedd8P29595 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nedd8P29595 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.98□□□□□ -0.33
Nedd8P29595 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nedd8P29595 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nedd8P29595 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.98□□□□□ -0.33
Nedd8P29595 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.98□□□□□ -0.33
Nedd8P29595 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nedd8P29595 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nedd8P29595 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.98□□□□□ -0.33
Nedd8P29595 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nedd8P29595 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nedd8P29595 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.98□□□□□ -0.33
Nedd8P29595 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nedd8P29595 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Nedd8P29595 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nedd8P29595 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nedd8P29595 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nedd8P29595 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nedd8P29595 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Nedd8P29595 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Nedd8P29595 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nedd8P29595 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.97□□□□□ -0.33
Nedd8P29595 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nedd8P29595 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nedd8P29595 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nedd8P29595 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.97□□□□□ -0.33
Nedd8P29595 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Nedd8P29595 Gm8097-201ENSMUST00000117903 829 ntBASIC12.97□□□□□ -0.33
Nedd8P29595 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nedd8P29595 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Nedd8P29595 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC12.97□□□□□ -0.33
Nedd8P29595 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nedd8P29595 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.97□□□□□ -0.33
Nedd8P29595 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12.97□□□□□ -0.33
Nedd8P29595 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nedd8P29595 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Nedd8P29595 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nedd8P29595 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nedd8P29595 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nedd8P29595 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nedd8P29595 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nedd8P29595 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms