Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
P20040 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.53□□□□□ -0.4
P20040 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P20040 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P20040 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
P20040 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.53□□□□□ -0.4
P20040 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.53□□□□□ -0.4
P20040 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P20040 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
P20040 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P20040 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
P20040 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P20040 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P20040 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
P20040 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
P20040 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
P20040 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
P20040 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
P20040 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
P20040 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
P20040 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.52□□□□□ -0.41
P20040 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.52□□□□□ -0.41
P20040 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
P20040 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
P20040 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P20040 Gm6973-201ENSMUST00000117080 721 ntBASIC12.52□□□□□ -0.41
P20040 Gm14701-201ENSMUST00000117156 348 ntBASIC12.52□□□□□ -0.41
P20040 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
P20040 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.52□□□□□ -0.41
P20040 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.52□□□□□ -0.41
P20040 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.52□□□□□ -0.41
P20040 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.52□□□□□ -0.41
P20040 Gm18737-201ENSMUST00000173594 937 ntBASIC12.52□□□□□ -0.41
P20040 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
P20040 Mir6990-201ENSMUST00000183724 91 ntBASIC12.52□□□□□ -0.41
P20040 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.52□□□□□ -0.41
P20040 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.52□□□□□ -0.41
P20040 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
P20040 Gm8396-201ENSMUST00000057361 823 ntBASIC12.52□□□□□ -0.41
P20040 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
P20040 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P20040 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P20040 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
P20040 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.52□□□□□ -0.41
P20040 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
P20040 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
P20040 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P20040 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P20040 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.52□□□□□ -0.41
P20040 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.52□□□□□ -0.41
P20040 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P20040 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
P20040 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
P20040 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
P20040 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.41
P20040 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P20040 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
P20040 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P20040 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P20040 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
P20040 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P20040 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P20040 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
P20040 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P20040 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P20040 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P20040 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
P20040 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
P20040 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P20040 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
P20040 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
P20040 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.51□□□□□ -0.41
P20040 Gm44335-201ENSMUST00000196879 141 ntBASIC12.51□□□□□ -0.41
P20040 Gm44297-201ENSMUST00000198304 141 ntBASIC12.51□□□□□ -0.41
P20040 Gm44346-201ENSMUST00000198851 141 ntBASIC12.51□□□□□ -0.41
P20040 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P20040 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.51□□□□□ -0.41
P20040 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P20040 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P20040 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
P20040 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
P20040 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
P20040 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P20040 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P20040 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P20040 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
P20040 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.51□□□□□ -0.41
P20040 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
P20040 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P20040 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
P20040 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P20040 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
P20040 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
P20040 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P20040 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
P20040 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
P20040 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P20040 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.5□□□□□ -0.41
P20040 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P20040 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms