Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PtcraP0C6B2 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PtcraP0C6B2 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
PtcraP0C6B2 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
PtcraP0C6B2 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PtcraP0C6B2 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
PtcraP0C6B2 Mir1897-201ENSMUST00000122581 272 ntBASIC12.24□□□□□ -0.45
PtcraP0C6B2 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
PtcraP0C6B2 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
PtcraP0C6B2 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
PtcraP0C6B2 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
PtcraP0C6B2 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
PtcraP0C6B2 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
PtcraP0C6B2 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PtcraP0C6B2 Gm3436-201ENSMUST00000179930 840 ntBASIC12.24□□□□□ -0.45
PtcraP0C6B2 Gm27618-201ENSMUST00000183671 60 ntBASIC12.24□□□□□ -0.45
PtcraP0C6B2 Gm27321-201ENSMUST00000185021 205 ntBASIC12.24□□□□□ -0.45
PtcraP0C6B2 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.24□□□□□ -0.45
PtcraP0C6B2 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.24□□□□□ -0.45
PtcraP0C6B2 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.24□□□□□ -0.45
PtcraP0C6B2 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
PtcraP0C6B2 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PtcraP0C6B2 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PtcraP0C6B2 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
PtcraP0C6B2 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PtcraP0C6B2 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
PtcraP0C6B2 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PtcraP0C6B2 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
PtcraP0C6B2 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PtcraP0C6B2 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.24□□□□□ -0.45
PtcraP0C6B2 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.23□□□□□ -0.45
PtcraP0C6B2 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PtcraP0C6B2 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PtcraP0C6B2 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
PtcraP0C6B2 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
PtcraP0C6B2 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
PtcraP0C6B2 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.23□□□□□ -0.45
PtcraP0C6B2 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
PtcraP0C6B2 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PtcraP0C6B2 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
PtcraP0C6B2 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
PtcraP0C6B2 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PtcraP0C6B2 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PtcraP0C6B2 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PtcraP0C6B2 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PtcraP0C6B2 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
PtcraP0C6B2 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PtcraP0C6B2 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
PtcraP0C6B2 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.23□□□□□ -0.45
PtcraP0C6B2 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PtcraP0C6B2 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PtcraP0C6B2 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
PtcraP0C6B2 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.23□□□□□ -0.45
PtcraP0C6B2 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.23□□□□□ -0.45
PtcraP0C6B2 Gm44344-201ENSMUST00000200287 129 ntBASIC12.23□□□□□ -0.45
PtcraP0C6B2 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PtcraP0C6B2 Gm5425-201ENSMUST00000214125 459 ntBASIC12.23□□□□□ -0.45
PtcraP0C6B2 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PtcraP0C6B2 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
PtcraP0C6B2 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PtcraP0C6B2 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PtcraP0C6B2 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PtcraP0C6B2 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
PtcraP0C6B2 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
PtcraP0C6B2 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
PtcraP0C6B2 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
PtcraP0C6B2 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
PtcraP0C6B2 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
PtcraP0C6B2 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.23□□□□□ -0.45
PtcraP0C6B2 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
PtcraP0C6B2 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PtcraP0C6B2 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PtcraP0C6B2 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
PtcraP0C6B2 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
PtcraP0C6B2 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PtcraP0C6B2 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
PtcraP0C6B2 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
PtcraP0C6B2 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PtcraP0C6B2 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
PtcraP0C6B2 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PtcraP0C6B2 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
PtcraP0C6B2 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
PtcraP0C6B2 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PtcraP0C6B2 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
PtcraP0C6B2 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
PtcraP0C6B2 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
PtcraP0C6B2 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PtcraP0C6B2 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
PtcraP0C6B2 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PtcraP0C6B2 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.22□□□□□ -0.45
PtcraP0C6B2 Gm15460-201ENSMUST00000118147 391 ntBASIC12.22□□□□□ -0.45
PtcraP0C6B2 Gm15920-201ENSMUST00000118998 402 ntBASIC12.22□□□□□ -0.45
PtcraP0C6B2 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.22□□□□□ -0.45
PtcraP0C6B2 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.22□□□□□ -0.45
PtcraP0C6B2 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.22□□□□□ -0.45
PtcraP0C6B2 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PtcraP0C6B2 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
PtcraP0C6B2 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PtcraP0C6B2 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.22□□□□□ -0.45
PtcraP0C6B2 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms