Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfrbP05622 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.25□□□□□ -0.13
PdgfrbP05622 CT009738.1-201ENSMUST00000219031 809 ntBASIC14.25□□□□□ -0.13
PdgfrbP05622 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
PdgfrbP05622 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfrbP05622 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfrbP05622 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.25□□□□□ -0.13
PdgfrbP05622 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfrbP05622 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfrbP05622 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfrbP05622 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfrbP05622 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
PdgfrbP05622 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfrbP05622 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfrbP05622 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfrbP05622 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfrbP05622 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfrbP05622 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
PdgfrbP05622 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfrbP05622 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
PdgfrbP05622 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfrbP05622 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
PdgfrbP05622 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfrbP05622 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfrbP05622 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfrbP05622 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.24□□□□□ -0.13
PdgfrbP05622 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfrbP05622 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfrbP05622 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfrbP05622 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfrbP05622 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfrbP05622 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
PdgfrbP05622 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfrbP05622 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.24□□□□□ -0.13
PdgfrbP05622 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfrbP05622 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.24□□□□□ -0.13
PdgfrbP05622 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.24□□□□□ -0.13
PdgfrbP05622 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.24□□□□□ -0.13
PdgfrbP05622 Gm5867-201ENSMUST00000063197 592 ntBASIC14.24□□□□□ -0.13
PdgfrbP05622 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfrbP05622 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfrbP05622 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfrbP05622 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfrbP05622 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfrbP05622 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfrbP05622 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfrbP05622 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfrbP05622 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfrbP05622 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
PdgfrbP05622 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
PdgfrbP05622 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfrbP05622 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfrbP05622 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
PdgfrbP05622 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfrbP05622 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfrbP05622 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfrbP05622 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfrbP05622 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
PdgfrbP05622 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
PdgfrbP05622 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfrbP05622 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PdgfrbP05622 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.23□□□□□ -0.13
PdgfrbP05622 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PdgfrbP05622 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
PdgfrbP05622 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC14.23□□□□□ -0.13
PdgfrbP05622 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PdgfrbP05622 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PdgfrbP05622 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.23□□□□□ -0.13
PdgfrbP05622 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PdgfrbP05622 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PdgfrbP05622 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PdgfrbP05622 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.23□□□□□ -0.13
PdgfrbP05622 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
PdgfrbP05622 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PdgfrbP05622 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PdgfrbP05622 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
PdgfrbP05622 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.23□□□□□ -0.13
PdgfrbP05622 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.23□□□□□ -0.13
PdgfrbP05622 Mir1897-201ENSMUST00000122581 272 ntBASIC14.23□□□□□ -0.13
PdgfrbP05622 AA543401-201ENSMUST00000164248 1269 ntBASIC14.23□□□□□ -0.13
PdgfrbP05622 Gm22175-201ENSMUST00000175007 78 ntBASIC14.23□□□□□ -0.13
PdgfrbP05622 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
PdgfrbP05622 Gm27622-201ENSMUST00000183779 60 ntBASIC14.23□□□□□ -0.13
PdgfrbP05622 Gm38294-201ENSMUST00000192831 381 ntBASIC14.23□□□□□ -0.13
PdgfrbP05622 Gm16476-201ENSMUST00000221544 139 ntBASIC14.23□□□□□ -0.13
PdgfrbP05622 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PdgfrbP05622 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PdgfrbP05622 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PdgfrbP05622 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
PdgfrbP05622 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
PdgfrbP05622 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
PdgfrbP05622 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PdgfrbP05622 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
PdgfrbP05622 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PdgfrbP05622 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PdgfrbP05622 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PdgfrbP05622 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PdgfrbP05622 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PdgfrbP05622 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PdgfrbP05622 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms