Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col4a1P02463 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col4a1P02463 Gm11793-201ENSMUST00000120433 981 ntBASIC17.01■□□□□ 0.31
Col4a1P02463 Gm11400-201ENSMUST00000120853 1214 ntBASIC17.01■□□□□ 0.31
Col4a1P02463 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Col4a1P02463 Gm2639-201ENSMUST00000156881 1297 ntBASIC17.01■□□□□ 0.31
Col4a1P02463 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col4a1P02463 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Col4a1P02463 Gm38241-201ENSMUST00000192641 898 ntBASIC17.01■□□□□ 0.31
Col4a1P02463 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col4a1P02463 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Col4a1P02463 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Col4a1P02463 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col4a1P02463 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Col4a1P02463 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC17■□□□□ 0.31
Col4a1P02463 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC17■□□□□ 0.31
Col4a1P02463 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col4a1P02463 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Col4a1P02463 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17■□□□□ 0.31
Col4a1P02463 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC17■□□□□ 0.31
Col4a1P02463 Gm43818-201ENSMUST00000200605 466 ntBASIC17■□□□□ 0.31
Col4a1P02463 Tyms-ps-201ENSMUST00000219550 915 ntBASIC17■□□□□ 0.31
Col4a1P02463 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC17■□□□□ 0.31
Col4a1P02463 Gm24526-201ENSMUST00000082921 158 ntBASIC17■□□□□ 0.31
Col4a1P02463 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Col4a1P02463 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC17■□□□□ 0.31
Col4a1P02463 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col4a1P02463 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC17■□□□□ 0.31
Col4a1P02463 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Col4a1P02463 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col4a1P02463 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col4a1P02463 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.99■□□□□ 0.31
Col4a1P02463 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col4a1P02463 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col4a1P02463 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC16.99■□□□□ 0.31
Col4a1P02463 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Col4a1P02463 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col4a1P02463 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.99■□□□□ 0.31
Col4a1P02463 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col4a1P02463 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC16.99■□□□□ 0.31
Col4a1P02463 Gm12329-201ENSMUST00000120829 1007 ntBASIC16.99■□□□□ 0.31
Col4a1P02463 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC16.99■□□□□ 0.31
Col4a1P02463 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Col4a1P02463 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col4a1P02463 Gm6222-202ENSMUST00000182143 629 ntBASIC16.99■□□□□ 0.31
Col4a1P02463 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
Col4a1P02463 Gm10146-201ENSMUST00000072739 309 ntBASIC16.99■□□□□ 0.31
Col4a1P02463 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col4a1P02463 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Col4a1P02463 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col4a1P02463 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.99■□□□□ 0.31
Col4a1P02463 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Col4a1P02463 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col4a1P02463 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC16.99■□□□□ 0.31
Col4a1P02463 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col4a1P02463 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col4a1P02463 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col4a1P02463 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col4a1P02463 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col4a1P02463 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col4a1P02463 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC16.98■□□□□ 0.31
Col4a1P02463 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC16.98■□□□□ 0.31
Col4a1P02463 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC16.98■□□□□ 0.31
Col4a1P02463 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Col4a1P02463 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col4a1P02463 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC16.98■□□□□ 0.31
Col4a1P02463 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col4a1P02463 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col4a1P02463 Gm45880-201ENSMUST00000213041 853 ntBASIC16.98■□□□□ 0.31
Col4a1P02463 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col4a1P02463 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col4a1P02463 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col4a1P02463 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col4a1P02463 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col4a1P02463 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Col4a1P02463 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col4a1P02463 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC16.98■□□□□ 0.31
Col4a1P02463 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col4a1P02463 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col4a1P02463 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC16.98■□□□□ 0.31
Col4a1P02463 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC16.98■□□□□ 0.31
Col4a1P02463 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col4a1P02463 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col4a1P02463 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col4a1P02463 Gm7584-201ENSMUST00000175829 940 ntBASIC16.97■□□□□ 0.31
Col4a1P02463 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Col4a1P02463 Gm37497-201ENSMUST00000195830 798 ntBASIC16.97■□□□□ 0.31
Col4a1P02463 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col4a1P02463 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC16.97■□□□□ 0.31
Col4a1P02463 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col4a1P02463 Gm14608-201ENSMUST00000120030 1553 ntBASIC16.97■□□□□ 0.31
Col4a1P02463 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col4a1P02463 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col4a1P02463 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
Col4a1P02463 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col4a1P02463 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC16.97■□□□□ 0.31
Col4a1P02463 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col4a1P02463 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Col4a1P02463 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col4a1P02463 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms