Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
IghmP01872 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
IghmP01872 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
IghmP01872 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
IghmP01872 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
IghmP01872 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
IghmP01872 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
IghmP01872 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
IghmP01872 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
IghmP01872 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IghmP01872 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
IghmP01872 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
IghmP01872 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
IghmP01872 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
IghmP01872 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
IghmP01872 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
IghmP01872 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IghmP01872 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IghmP01872 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.18□□□□□ -0.3
IghmP01872 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
IghmP01872 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
IghmP01872 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.18□□□□□ -0.3
IghmP01872 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.18□□□□□ -0.3
IghmP01872 Gm9824-201ENSMUST00000178707 561 ntBASIC13.18□□□□□ -0.3
IghmP01872 Mir6990-201ENSMUST00000183724 91 ntBASIC13.18□□□□□ -0.3
IghmP01872 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
IghmP01872 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.18□□□□□ -0.3
IghmP01872 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
IghmP01872 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
IghmP01872 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IghmP01872 Mir125a-201ENSMUST00000083545 68 ntBASIC13.18□□□□□ -0.3
IghmP01872 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IghmP01872 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
IghmP01872 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
IghmP01872 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IghmP01872 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IghmP01872 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.18□□□□□ -0.3
IghmP01872 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
IghmP01872 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IghmP01872 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
IghmP01872 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
IghmP01872 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.18□□□□□ -0.3
IghmP01872 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IghmP01872 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
IghmP01872 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IghmP01872 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
IghmP01872 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IghmP01872 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
IghmP01872 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IghmP01872 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IghmP01872 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IghmP01872 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
IghmP01872 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.17□□□□□ -0.3
IghmP01872 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IghmP01872 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IghmP01872 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
IghmP01872 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IghmP01872 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
IghmP01872 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IghmP01872 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.17□□□□□ -0.3
IghmP01872 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IghmP01872 Gm18766-201ENSMUST00000189811 808 ntBASIC13.17□□□□□ -0.3
IghmP01872 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
IghmP01872 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IghmP01872 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
IghmP01872 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IghmP01872 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
IghmP01872 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IghmP01872 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IghmP01872 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
IghmP01872 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IghmP01872 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
IghmP01872 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IghmP01872 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IghmP01872 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
IghmP01872 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
IghmP01872 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IghmP01872 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IghmP01872 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
IghmP01872 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
IghmP01872 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
IghmP01872 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
IghmP01872 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.16□□□□□ -0.3
IghmP01872 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
IghmP01872 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
IghmP01872 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IghmP01872 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
IghmP01872 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IghmP01872 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.16□□□□□ -0.3
IghmP01872 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IghmP01872 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IghmP01872 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
IghmP01872 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
IghmP01872 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
IghmP01872 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IghmP01872 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
IghmP01872 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.16□□□□□ -0.3
IghmP01872 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
IghmP01872 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.16□□□□□ -0.3
IghmP01872 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms